| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228285
Identifier: 21228285
GI number: 21228285
Start: 2589664
End: 2589921
Strand: Reverse
Name: 21228285
Synonym: MM_2183
Alternate gene names: NA
Gene position: 2589921-2589664 (Counterclockwise)
Preceding gene: 21228286
Following gene: 21228282
Centisome position: 63.23
GC content: 34.11
Gene sequence:
>258_bases ATGCATATTACCAGCAAGACAGAAACAGAAGATACAATATTTGAATTTACACTTTCTCTCTCTGGCTCACCTAAAAGCTC ATTCAACCAGACCCTGGTATACATTTTAAGAGGAAAAGACGGCTTAGACTTTGCAGAAATAGAGATATCCCAGATAATAA CAAGAACAGGCAACTTTAATGAAAAAAAGATATCACAATGGTACATTGAAGAGCCAGGAAATAAAAAGCCTGGTGAAAAT ATAGTAAACAACAAATAA
Upstream 100 bases:
>100_bases TTAGGACTTCTTTATTAAATATATCCTCAAAGTCTCGTAAACTCGTAACGGATGCCACATGCAAAATTGGGAATTACATA AGAGAATAAGAGGAAAAAAC
Downstream 100 bases:
>100_bases CTGAAATTATTAAGAATATGAACCAGATTATTGAAAATGAGCGAAATATAAAATGAGGCTATTCCTAAACTCAAAATTTG ATTTTTGAATCTCGTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MHITSKTETEDTIFEFTLSLSGSPKSSFNQTLVYILRGKDGLDFAEIEISQIITRTGNFNEKKISQWYIEEPGNKKPGEN IVNNK
Sequences:
>Translated_85_residues MHITSKTETEDTIFEFTLSLSGSPKSSFNQTLVYILRGKDGLDFAEIEISQIITRTGNFNEKKISQWYIEEPGNKKPGEN IVNNK >Mature_85_residues MHITSKTETEDTIFEFTLSLSGSPKSSFNQTLVYILRGKDGLDFAEIEISQIITRTGNFNEKKISQWYIEEPGNKKPGEN IVNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9669; Mature: 9669
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHITSKTETEDTIFEFTLSLSGSPKSSFNQTLVYILRGKDGLDFAEIEISQIITRTGNFN CCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCC EKKISQWYIEEPGNKKPGENIVNNK CCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MHITSKTETEDTIFEFTLSLSGSPKSSFNQTLVYILRGKDGLDFAEIEISQIITRTGNFN CCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCC EKKISQWYIEEPGNKKPGENIVNNK CCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA