| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yfeJ [H]
Identifier: 21228282
GI number: 21228282
Start: 2585728
End: 2586450
Strand: Reverse
Name: yfeJ [H]
Synonym: MM_2180
Alternate gene names: 21228282
Gene position: 2586450-2585728 (Counterclockwise)
Preceding gene: 21228285
Following gene: 21228280
Centisome position: 63.14
GC content: 45.23
Gene sequence:
>723_bases ATGAAAATCCACTGCCTCCAGCACCTGAAAAACGAGACCCTTGGAAACATAGGAACCTGGGTGACTCTGAAAGGGCACAG CCTTACAAAAACCCTGCCTTGTGAAAAATCTGCTTTTCCTGATCCCGCAGAATTTGATATGCTTCTGATAATGGGCGGCA CTATGAGTGTTTATCAGGAGAAAGAGTACACCTGGCTGAAACCTGAAAAAGAGTTTGTAAAAAAAGTAATAGGCATGGGT AAACCTGTACTGGGAAGCTGTTTCGGGGCACAGTTGATTGCAGATGTTCTGGGAGGAAAAGTTACCAGAAACCGGTTCAA GGAGATAGGCTGGCACAGGGTAAAAGCTGTTGCAGAGGAAAATTCGAATAATGAAGGAAAAATAATCTCAGGGCTTCCTG CAGGCTTATTTCCCGAGTTTACCGCATTTATGTGGCATGGTGACACTTTCGAAATCCCAGAAGGTGCGGTAAGGCTTTTC AAAAGCGAAGCCTGCCAGAACCAGGGTTTCATTTATGGGGATAATGTCCTCGGGCTGCAGTTCCACCCTGAAACCGACAG GCAGTGGATATGTAACCTGATAGAAGATTCGGGACATGAGCTTGTTGAAGGAGAATATATCCAGCCGGGAGAAGAAATGC TCAAAAACGAGCACTTTCTTGAAGGCTCCCGGAAAATTGCTTTTTCCCTCATGGACTGGTTTGAGAAAAAATGTGGAAAT TGA
Upstream 100 bases:
>100_bases AATGTCTTTGATTACCGGGAAAACCTGATTTTGAAAAAATAAAACAGTACTGAAATCGAAACTAAAGTGAAACTGAAATC GAACCCAAAGTGAAAACCCC
Downstream 100 bases:
>100_bases ATTGAAAGTGGATAGCCACAAGTAAAAATCTTTAAACCTTCAGGCAGGAGCGGATATTAATTGCTCCGTCCTTAGATAAA TTCCCACGGTTCCTTTTTAA
Product: GMP synthase
Products: AMP; diphosphate; GMP; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKIHCLQHLKNETLGNIGTWVTLKGHSLTKTLPCEKSAFPDPAEFDMLLIMGGTMSVYQEKEYTWLKPEKEFVKKVIGMG KPVLGSCFGAQLIADVLGGKVTRNRFKEIGWHRVKAVAEENSNNEGKIISGLPAGLFPEFTAFMWHGDTFEIPEGAVRLF KSEACQNQGFIYGDNVLGLQFHPETDRQWICNLIEDSGHELVEGEYIQPGEEMLKNEHFLEGSRKIAFSLMDWFEKKCGN
Sequences:
>Translated_240_residues MKIHCLQHLKNETLGNIGTWVTLKGHSLTKTLPCEKSAFPDPAEFDMLLIMGGTMSVYQEKEYTWLKPEKEFVKKVIGMG KPVLGSCFGAQLIADVLGGKVTRNRFKEIGWHRVKAVAEENSNNEGKIISGLPAGLFPEFTAFMWHGDTFEIPEGAVRLF KSEACQNQGFIYGDNVLGLQFHPETDRQWICNLIEDSGHELVEGEYIQPGEEMLKNEHFLEGSRKIAFSLMDWFEKKCGN >Mature_240_residues MKIHCLQHLKNETLGNIGTWVTLKGHSLTKTLPCEKSAFPDPAEFDMLLIMGGTMSVYQEKEYTWLKPEKEFVKKVIGMG KPVLGSCFGAQLIADVLGGKVTRNRFKEIGWHRVKAVAEENSNNEGKIISGLPAGLFPEFTAFMWHGDTFEIPEGAVRLF KSEACQNQGFIYGDNVLGLQFHPETDRQWICNLIEDSGHELVEGEYIQPGEEMLKNEHFLEGSRKIAFSLMDWFEKKCGN
Specific function: Catalyzes The Synthesis Of Gmp From Xmp. [C]
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 6.3.5.2
Molecular weight: Translated: 27116; Mature: 27116
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHCLQHLKNETLGNIGTWVTLKGHSLTKTLPCEKSAFPDPAEFDMLLIMGGTMSVYQE CCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHC KEYTWLKPEKEFVKKVIGMGKPVLGSCFGAQLIADVLGGKVTRNRFKEIGWHRVKAVAEE CCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC NSNNEGKIISGLPAGLFPEFTAFMWHGDTFEIPEGAVRLFKSEACQNQGFIYGDNVLGLQ CCCCCCCEEECCCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEEEE FHPETDRQWICNLIEDSGHELVEGEYIQPGEEMLKNEHFLEGSRKIAFSLMDWFEKKCGN ECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIHCLQHLKNETLGNIGTWVTLKGHSLTKTLPCEKSAFPDPAEFDMLLIMGGTMSVYQE CCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHC KEYTWLKPEKEFVKKVIGMGKPVLGSCFGAQLIADVLGGKVTRNRFKEIGWHRVKAVAEE CCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC NSNNEGKIISGLPAGLFPEFTAFMWHGDTFEIPEGAVRLFKSEACQNQGFIYGDNVLGLQ CCCCCCCEEECCCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEEEE FHPETDRQWICNLIEDSGHELVEGEYIQPGEEMLKNEHFLEGSRKIAFSLMDWFEKKCGN ECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 2 {1-ribosyl-4,6-dihydroxypyrazolo[3,4-d]-pyrimidine} 0.058 {XMP}} 0.029 {XMP}} 1 {NH4+}} 0.42 {6-thioXMP}} 0.35 {8-azaXMP}} 0.53 {ATP}} [C]
Substrates: ATP; xanthosine 5'-phosphate; L-glutamine; H2O
Specific reaction: ATP + xanthosine 5'-phosphate + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate
General reaction: Amination [C]
Inhibitor: 1, N6-Ethenoadenosine; 1-Methyl adenosine 5'-phosphate 5'-phosphate; 2', 3'-Dihydroadenosine; 2'-Deoxyadenosine; 2, 6-Diaminopurine ribonucleoside; 2-Amino-6-methyl thiopurine ribonucleoside; 2-Fluoroadenosine; 3'-Deoxyadenosine; 5'-Azido-5'-deoxyadenosin
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]