| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is divJ [H]
Identifier: 21228280
GI number: 21228280
Start: 2582321
End: 2584762
Strand: Reverse
Name: divJ [H]
Synonym: MM_2178
Alternate gene names: 21228280
Gene position: 2584762-2582321 (Counterclockwise)
Preceding gene: 21228282
Following gene: 21228276
Centisome position: 63.1
GC content: 41.89
Gene sequence:
>2442_bases ATGGAACTTACAGCAGCATATATTAAAGCAGGCCTTGAACAGAACGAGCGCTGCATCTGGCTTGTTCCGGACTTCCAGAG TGCAGAAAAAGCGAAAAATTTACTTTCTAACTCTGATCTGGATATCGAAAACCGTATAGAGAAATCCAGGCTTAAGATAA TTCCCCTGAAAGAGAAAGATGACCCTTCCATCAAACAGACAGAGACCTCAAGGATCTATTTTGACTGGAAAGCAGGGAAC CCGCAGAAAGAGATAATCAAATTCATTCACGCAGGAAACTGGAGATATCTGCGCATTAACCTTGAGGTTGGAGCCTTTGG AAAGTCAATAACAACTTCCCTTAAGGAGCTGAGGTGCGTCCTTGCTGAGAATATGCCTGAAAAGAAAATCAGGCCACTCT TTATGATAAAAGAGGAAGATCTTTCCGCGGAAGAGGTTTTCAACCTTATAGAAGCCGGAGAAAAACTTGTAATTAAAAGA GAAGGTAAGTGGAAGTTTCTTAAAATAAAACAAGAAAGCCCGGACAAAAAATTTAAGACATTGATTGAGAATTCAGGTGA CTCAATTCTTATACACGATATGAATGGAAAAGTTCTCGAAGCAAACCATGTAGCCTGTGAAACCTTTGGATATACTCGCA GTAAAATGATCGGAAAACACATAAAAGATCTAAGGACCAGCATCCACCTTATAGAGTTCGGGCAGCAGATAGAAAAACTG AAGCAAACAGGATATTTTACTTTTGAAATGGATTCACTGCGGAGAGACGGCACGGTTATTCCTCAAGAAGTCAATAACAG GTTGATTGAATACGACGGGGAAACTGCCGTACTATCCATAGGCAGAGATATCAGCAAACGCAGACAGACCGAAAAAGCCC TGAGAGATTCCGAAAGAAAATACCGCATGCTTTTTGAAGAATTCCCCGGGGGAATAGCCCAGTTCGACAAGTACGGGACT ATCATCGTATGTAACGAAAATTTTGTAAATTTTACGGGCAGTGGTGAGAACGAAAAACTCATTTTCAATTTGCTGAACCC TCCGGAAGAAAAGAAACAGGAGGAAAAAGGCTTCACCTGTCTCCCCGAAGTTCCCATCCATTGCGACATAAAATATATTT CCAGCCTTGAGGACGAAATTATACCCGGTGAGATAACCTATAAGCCTCTGATTTCGGAAAATTCCAGATTTAACGGCGGC ATTATTCTTGTGGAGGACCTGACCGAAGTAAAAAGGCTGGAAGCAGTCAGGCTTCAGCAAACAGAGACCCTCAGAAAGCT TGTTGGTTCAATTCCTGTACCTGCATTCTGTAAGGACAGAAACGGGGTATATATTGCCTGCAATAAGGGTTTTGAAAACC TTCTGCGGGTGCAAAAACAGGATATTATCGGAAAGCACATCTACGATTTCATCCCCCATAAAATTGCTGAAAATTACCAT GCAATGGATATAGGACTTGTAAAACACAAAAGAAACCATGTATATGAGACCTCTTTGAAATTTCCTGACGGCTCAGTACA CCAGGTGATGCTCAATAAATTCATATTCAGCGGCGTGACAGAAGAAGACTCGGTTCTCCTGGGGATTATGATTGACATAA CAGAACGAAAGCAGGCTGAAGAGAGAATGCTTCAGGCGAAAATGGTTGCTGAAGCCGCAAACCGGGCGAAAACCACCTTC ATTGTCAATATGAGCCATGAGCTGAGAACTCCTCTGAACGCAGTTATAGGGTTCTCTGATCTCCTTTTAAGTGAAACTGT CGGTCCTCTTAATGAGAAACAGAAAAGGTACACCGAAAATATTTCAAAGAGCGGGAACCACCTTCTCGACGTAATCAATG ACGTGCTGGACATCTCAAAGCTTGAACTGGGAAATATTGAGCTCTACTACGAAACAGTGGACGTTGCAGGGATAATTGAA GAAGTCCAGAGGGTGCTCTCTCCCCTTTCAGCGGATAAAAATATTATAATAGAATCGTATATCGAGAAGGACCTGAAAAC TGTAATTGCCGACAGAGTAAAACTAAAACAGATCCTTTACAATATTTTGAACAATGCCATAAAGTTCTCATCAGAAAACG GGAAAGTAAACATTTATGCAGAACCCAGAGAAGACATGATTGAGATCAGCGTAGAGGACGAAGGCATTGGCATTCAGGAA TCCGATTACGAAAAAGTCTTCCAGCCATTCGTGCAGATTGATGAGTCCATATCCAGAAAACATGGAGGTGTTGGACTCGG GCTTGCACTCGTCAAAAGGTTCGTAGAGCTCCACGGAGGAAAGGTGTGGGTTAAAGCCAGCCCGGGTGGAGGAAGTATAT TCACATTCAGGATCCCAAAAAATCCCCAGAACAAAATTAGGGAATACATGAGTCCTGTACAAATACCGTATAATCTTGAA ATTGAAAGAGAAAAAGAGAAAATTAAGGAAGAAGCAAACTAA
Upstream 100 bases:
>100_bases GTTAAATATTCAAAAGAGAAAAGTCAAATCAGAGTTCTGTTTCTGTTCGTCTATCCCGGCAAATGGCCTCGCTGCAGTTT ATAAGTATCCGGAAGAAAAG
Downstream 100 bases:
>100_bases ACTTAATTCAGTAAATGAATGTAAAGAGAAAAATGAATGATAAATGTAAAGAGAAAAATGAATGCGGTAAGGAAAAAATG AAGTAATAGATAATAAAAAA
Product: two component system histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MELTAAYIKAGLEQNERCIWLVPDFQSAEKAKNLLSNSDLDIENRIEKSRLKIIPLKEKDDPSIKQTETSRIYFDWKAGN PQKEIIKFIHAGNWRYLRINLEVGAFGKSITTSLKELRCVLAENMPEKKIRPLFMIKEEDLSAEEVFNLIEAGEKLVIKR EGKWKFLKIKQESPDKKFKTLIENSGDSILIHDMNGKVLEANHVACETFGYTRSKMIGKHIKDLRTSIHLIEFGQQIEKL KQTGYFTFEMDSLRRDGTVIPQEVNNRLIEYDGETAVLSIGRDISKRRQTEKALRDSERKYRMLFEEFPGGIAQFDKYGT IIVCNENFVNFTGSGENEKLIFNLLNPPEEKKQEEKGFTCLPEVPIHCDIKYISSLEDEIIPGEITYKPLISENSRFNGG IILVEDLTEVKRLEAVRLQQTETLRKLVGSIPVPAFCKDRNGVYIACNKGFENLLRVQKQDIIGKHIYDFIPHKIAENYH AMDIGLVKHKRNHVYETSLKFPDGSVHQVMLNKFIFSGVTEEDSVLLGIMIDITERKQAEERMLQAKMVAEAANRAKTTF IVNMSHELRTPLNAVIGFSDLLLSETVGPLNEKQKRYTENISKSGNHLLDVINDVLDISKLELGNIELYYETVDVAGIIE EVQRVLSPLSADKNIIIESYIEKDLKTVIADRVKLKQILYNILNNAIKFSSENGKVNIYAEPREDMIEISVEDEGIGIQE SDYEKVFQPFVQIDESISRKHGGVGLGLALVKRFVELHGGKVWVKASPGGGSIFTFRIPKNPQNKIREYMSPVQIPYNLE IEREKEKIKEEAN
Sequences:
>Translated_813_residues MELTAAYIKAGLEQNERCIWLVPDFQSAEKAKNLLSNSDLDIENRIEKSRLKIIPLKEKDDPSIKQTETSRIYFDWKAGN PQKEIIKFIHAGNWRYLRINLEVGAFGKSITTSLKELRCVLAENMPEKKIRPLFMIKEEDLSAEEVFNLIEAGEKLVIKR EGKWKFLKIKQESPDKKFKTLIENSGDSILIHDMNGKVLEANHVACETFGYTRSKMIGKHIKDLRTSIHLIEFGQQIEKL KQTGYFTFEMDSLRRDGTVIPQEVNNRLIEYDGETAVLSIGRDISKRRQTEKALRDSERKYRMLFEEFPGGIAQFDKYGT IIVCNENFVNFTGSGENEKLIFNLLNPPEEKKQEEKGFTCLPEVPIHCDIKYISSLEDEIIPGEITYKPLISENSRFNGG IILVEDLTEVKRLEAVRLQQTETLRKLVGSIPVPAFCKDRNGVYIACNKGFENLLRVQKQDIIGKHIYDFIPHKIAENYH AMDIGLVKHKRNHVYETSLKFPDGSVHQVMLNKFIFSGVTEEDSVLLGIMIDITERKQAEERMLQAKMVAEAANRAKTTF IVNMSHELRTPLNAVIGFSDLLLSETVGPLNEKQKRYTENISKSGNHLLDVINDVLDISKLELGNIELYYETVDVAGIIE EVQRVLSPLSADKNIIIESYIEKDLKTVIADRVKLKQILYNILNNAIKFSSENGKVNIYAEPREDMIEISVEDEGIGIQE SDYEKVFQPFVQIDESISRKHGGVGLGLALVKRFVELHGGKVWVKASPGGGSIFTFRIPKNPQNKIREYMSPVQIPYNLE IEREKEKIKEEAN >Mature_813_residues MELTAAYIKAGLEQNERCIWLVPDFQSAEKAKNLLSNSDLDIENRIEKSRLKIIPLKEKDDPSIKQTETSRIYFDWKAGN PQKEIIKFIHAGNWRYLRINLEVGAFGKSITTSLKELRCVLAENMPEKKIRPLFMIKEEDLSAEEVFNLIEAGEKLVIKR EGKWKFLKIKQESPDKKFKTLIENSGDSILIHDMNGKVLEANHVACETFGYTRSKMIGKHIKDLRTSIHLIEFGQQIEKL KQTGYFTFEMDSLRRDGTVIPQEVNNRLIEYDGETAVLSIGRDISKRRQTEKALRDSERKYRMLFEEFPGGIAQFDKYGT IIVCNENFVNFTGSGENEKLIFNLLNPPEEKKQEEKGFTCLPEVPIHCDIKYISSLEDEIIPGEITYKPLISENSRFNGG IILVEDLTEVKRLEAVRLQQTETLRKLVGSIPVPAFCKDRNGVYIACNKGFENLLRVQKQDIIGKHIYDFIPHKIAENYH AMDIGLVKHKRNHVYETSLKFPDGSVHQVMLNKFIFSGVTEEDSVLLGIMIDITERKQAEERMLQAKMVAEAANRAKTTF IVNMSHELRTPLNAVIGFSDLLLSETVGPLNEKQKRYTENISKSGNHLLDVINDVLDISKLELGNIELYYETVDVAGIIE EVQRVLSPLSADKNIIIESYIEKDLKTVIADRVKLKQILYNILNNAIKFSSENGKVNIYAEPREDMIEISVEDEGIGIQE SDYEKVFQPFVQIDESISRKHGGVGLGLALVKRFVELHGGKVWVKASPGGGSIFTFRIPKNPQNKIREYMSPVQIPYNLE IEREKEKIKEEAN
Specific function: Kinase required for the regulation of cell division and differentiation. Makes part of a signal transduction pathway, activating pleD by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=239, Percent_Identity=43.0962343096234, Blast_Score=178, Evalue=1e-45, Organism=Escherichia coli, GI48994928, Length=365, Percent_Identity=31.2328767123288, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI145693157, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI87081816, Length=252, Percent_Identity=32.1428571428571, Blast_Score=136, Evalue=5e-33, Organism=Escherichia coli, GI1788549, Length=380, Percent_Identity=27.8947368421053, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788713, Length=415, Percent_Identity=26.2650602409639, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=29.646017699115, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=24.4979919678715, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=24.6861924686192, Blast_Score=94, Evalue=5e-20, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=27.027027027027, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1790861, Length=222, Percent_Identity=27.9279279279279, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=29.0983606557377, Blast_Score=87, Evalue=6e-18, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=26.2008733624454, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=28.9473684210526, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788279, Length=204, Percent_Identity=30.8823529411765, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=23.3480176211454, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790551, Length=222, Percent_Identity=28.8288288288288, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789808, Length=223, Percent_Identity=28.2511210762332, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790300, Length=363, Percent_Identity=22.5895316804408, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=106, Percent_Identity=37.7358490566038, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 92993; Mature: 92993
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTAAYIKAGLEQNERCIWLVPDFQSAEKAKNLLSNSDLDIENRIEKSRLKIIPLKEKD CCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCC DPSIKQTETSRIYFDWKAGNPQKEIIKFIHAGNWRYLRINLEVGAFGKSITTSLKELRCV CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHH LAENMPEKKIRPLFMIKEEDLSAEEVFNLIEAGEKLVIKREGKWKFLKIKQESPDKKFKT HHCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCHHHHH LIENSGDSILIHDMNGKVLEANHVACETFGYTRSKMIGKHIKDLRTSIHLIEFGQQIEKL HHHCCCCEEEEECCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQTGYFTFEMDSLRRDGTVIPQEVNNRLIEYDGETAVLSIGRDISKRRQTEKALRDSERK HHCCCEEEEHHCCCCCCCCCCHHHCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHH YRMLFEEFPGGIAQFDKYGTIIVCNENFVNFTGSGENEKLIFNLLNPPEEKKQEEKGFTC HHHHHHHCCCCHHHHCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHHHHHCCCEE LPEVPIHCDIKYISSLEDEIIPGEITYKPLISENSRFNGGIILVEDLTEVKRLEAVRLQQ CCCCCCEECHHHHHCCHHCCCCCCEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH TETLRKLVGSIPVPAFCKDRNGVYIACNKGFENLLRVQKQDIIGKHIYDFIPHKIAENYH HHHHHHHHCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AMDIGLVKHKRNHVYETSLKFPDGSVHQVMLNKFIFSGVTEEDSVLLGIMIDITERKQAE EEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHH ERMLQAKMVAEAANRAKTTFIVNMSHELRTPLNAVIGFSDLLLSETVGPLNEKQKRYTEN HHHHHHHHHHHHHCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISKSGNHLLDVINDVLDISKLELGNIELYYETVDVAGIIEEVQRVLSPLSADKNIIIESY HHCCCHHHHHHHHHHHHHHHEEECCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH IEKDLKTVIADRVKLKQILYNILNNAIKFSSENGKVNIYAEPREDMIEISVEDEGIGIQE HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCC SDYEKVFQPFVQIDESISRKHGGVGLGLALVKRFVELHGGKVWVKASPGGGSIFTFRIPK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCC NPQNKIREYMSPVQIPYNLEIEREKEKIKEEAN CHHHHHHHHHCCCCCCCCEEECHHHHHHHHCCC >Mature Secondary Structure MELTAAYIKAGLEQNERCIWLVPDFQSAEKAKNLLSNSDLDIENRIEKSRLKIIPLKEKD CCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCC DPSIKQTETSRIYFDWKAGNPQKEIIKFIHAGNWRYLRINLEVGAFGKSITTSLKELRCV CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHH LAENMPEKKIRPLFMIKEEDLSAEEVFNLIEAGEKLVIKREGKWKFLKIKQESPDKKFKT HHCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCHHHHH LIENSGDSILIHDMNGKVLEANHVACETFGYTRSKMIGKHIKDLRTSIHLIEFGQQIEKL HHHCCCCEEEEECCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQTGYFTFEMDSLRRDGTVIPQEVNNRLIEYDGETAVLSIGRDISKRRQTEKALRDSERK HHCCCEEEEHHCCCCCCCCCCHHHCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHH YRMLFEEFPGGIAQFDKYGTIIVCNENFVNFTGSGENEKLIFNLLNPPEEKKQEEKGFTC HHHHHHHCCCCHHHHCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHHHHHCCCEE LPEVPIHCDIKYISSLEDEIIPGEITYKPLISENSRFNGGIILVEDLTEVKRLEAVRLQQ CCCCCCEECHHHHHCCHHCCCCCCEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH TETLRKLVGSIPVPAFCKDRNGVYIACNKGFENLLRVQKQDIIGKHIYDFIPHKIAENYH HHHHHHHHCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AMDIGLVKHKRNHVYETSLKFPDGSVHQVMLNKFIFSGVTEEDSVLLGIMIDITERKQAE EEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHH ERMLQAKMVAEAANRAKTTFIVNMSHELRTPLNAVIGFSDLLLSETVGPLNEKQKRYTEN HHHHHHHHHHHHHCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISKSGNHLLDVINDVLDISKLELGNIELYYETVDVAGIIEEVQRVLSPLSADKNIIIESY HHCCCHHHHHHHHHHHHHHHEEECCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH IEKDLKTVIADRVKLKQILYNILNNAIKFSSENGKVNIYAEPREDMIEISVEDEGIGIQE HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCC SDYEKVFQPFVQIDESISRKHGGVGLGLALVKRFVELHGGKVWVKASPGGGSIFTFRIPK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCC NPQNKIREYMSPVQIPYNLEIEREKEKIKEEAN CHHHHHHHHHCCCCCCCCEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1438215; 11259647 [H]