| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228281
Identifier: 21228281
GI number: 21228281
Start: 2585093
End: 2585617
Strand: Direct
Name: 21228281
Synonym: MM_2179
Alternate gene names: NA
Gene position: 2585093-2585617 (Clockwise)
Preceding gene: 21228279
Following gene: 21228283
Centisome position: 63.11
GC content: 43.81
Gene sequence:
>525_bases ATGCAAAGGGAAATTGAGGTTATTTGCGGAGAGGTCAATATCTCAGACCTTTCAGCTTTTCTAGGTAAAATAAACACTAT CGCTTCGGATAACAGAGTAACCATTCAGGGCCTTAACGCTGACCTGCTTGCGGGTGAAAAGCATCTTCATTTTGCAGTTG GGAAGGCTCTCAGGGCTGTAGCATCAGGAAAGAACGTGGCAAAAGACCCTGGAGTCGAGATCATGCGCTACGCAGCCGGA GAAAGGCAGATTGAAAGGAGTTTTTCCATAGGGCTCCATGAAGGAGAAAACAATGCGGTTTTTGTGCTGCTTGGAAAAAT AGATGGTCTGCTTATTGCTTTGGCAGAACTCAGGAAGCTTATCGAAGAAAAACCATGTTCCGAACTTCTAGCCTATTCCA GTTCAAAGCGAAAAGGAATCCTTTCTCTCTTCGGGATTACAGATGAAGAAATAAAAGCTTCAGGGGAAGAACATATCCCT GAACTTGTAATCGAGAGAGTTGCGCTTGCAAATTTCGTAAAATGA
Upstream 100 bases:
>100_bases AAAACTTTTATATCAGGTTGATTACTACACCCGCTTTTTCATAAACTTTCATCAACCGAAATCCTTATTGTAAAGCCCGG GATATGGCAGGGATATGGAA
Downstream 100 bases:
>100_bases AAGGTATTATTTAAAAAGGAACCGTGGGAATTTATCTAAGGACGGAGCAATTAATATCCGCTCCTGCCTGAAGGTTTAAA GATTTTTACTTGTGGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQREIEVICGEVNISDLSAFLGKINTIASDNRVTIQGLNADLLAGEKHLHFAVGKALRAVASGKNVAKDPGVEIMRYAAG ERQIERSFSIGLHEGENNAVFVLLGKIDGLLIALAELRKLIEEKPCSELLAYSSSKRKGILSLFGITDEEIKASGEEHIP ELVIERVALANFVK
Sequences:
>Translated_174_residues MQREIEVICGEVNISDLSAFLGKINTIASDNRVTIQGLNADLLAGEKHLHFAVGKALRAVASGKNVAKDPGVEIMRYAAG ERQIERSFSIGLHEGENNAVFVLLGKIDGLLIALAELRKLIEEKPCSELLAYSSSKRKGILSLFGITDEEIKASGEEHIP ELVIERVALANFVK >Mature_174_residues MQREIEVICGEVNISDLSAFLGKINTIASDNRVTIQGLNADLLAGEKHLHFAVGKALRAVASGKNVAKDPGVEIMRYAAG ERQIERSFSIGLHEGENNAVFVLLGKIDGLLIALAELRKLIEEKPCSELLAYSSSKRKGILSLFGITDEEIKASGEEHIP ELVIERVALANFVK
Specific function: Unknown
COG id: COG1617
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18894; Mature: 18894
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQREIEVICGEVNISDLSAFLGKINTIASDNRVTIQGLNADLLAGEKHLHFAVGKALRAV CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHH ASGKNVAKDPGVEIMRYAAGERQIERSFSIGLHEGENNAVFVLLGKIDGLLIALAELRKL HCCCCCCCCCCHHHHHHHHCHHHHHHHHHCEEEECCCCEEEEEECCHHHHHHHHHHHHHH IEEKPCSELLAYSSSKRKGILSLFGITDEEIKASGEEHIPELVIERVALANFVK HHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQREIEVICGEVNISDLSAFLGKINTIASDNRVTIQGLNADLLAGEKHLHFAVGKALRAV CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHH ASGKNVAKDPGVEIMRYAAGERQIERSFSIGLHEGENNAVFVLLGKIDGLLIALAELRKL HCCCCCCCCCCHHHHHHHHCHHHHHHHHHCEEEECCCCEEEEEECCHHHHHHHHHHHHHH IEEKPCSELLAYSSSKRKGILSLFGITDEEIKASGEEHIPELVIERVALANFVK HHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA