Click here to switch to the map view.

The map label for this gene is 21228279

Identifier: 21228279

GI number: 21228279

Start: 2580905

End: 2581717

Strand: Direct

Name: 21228279

Synonym: MM_2177

Alternate gene names: NA

Gene position: 2580905-2581717 (Clockwise)

Preceding gene: 21228278

Following gene: 21228281

Centisome position: 63.01

GC content: 42.56

Gene sequence:

>813_bases
ATGGTACGGTCTGCTGAAAAGCCCGCTTCCAGAAGACTGGTTGTTGAACGCTATACCTGGCTTGAAAGGGTTACCCATCT
GGTCCACCTTATCTCCATGTTTGTCCTTCTAATTACGGGATTCAAAATTTATACCGGATGGGGTTTCATGTCTTTTGAAT
CAGCAAGGGCTCTGCATATGATTGCAGTGCCTTTTTTCCTTGTCGCAAACTGGCTTCTTGTCCCTTACAATATATTTTCC
TGCAAAGAAGAGCACTGCAGCATTGGAGACCGCCTATATCATTTCAAAGAATCTTATTTATTCGGAAAAGATGACGCAGA
ACGTCTCCTTGACATAATAAAAAACTTTTTCGGGAAGGGCGAATATCCGGCATTTACAGTCTATGACGAGCGGAAAGGAC
ATTATGTCACCAAACTACACCCCGGGATGAAGCTTTTGCTTATTTTTGAAAGCACGGCAATTGTCCTAGTAGCACTTACG
GGAATAGTTCTTTATAGCCTTACCTGGTCTCCGTTTGGGATTCCAGTCTCAGAATGGATACTTTCAATATCCTGGTTCTT
CGCGTCTATGATTAATATGGACGGTCTGGCATTAATCCGTTATCTGCATCTTCTGGCAGCTTACTGGTTTGTCCTTGAAC
TTATAATTCATGTAGGAATCCTTGAGCTTGACCCTGATGCATGGAAATACCATAAGGCAATTTTCTGGTCAGGAAATGAA
GATCTATCAGACAGGCATTTTGTCAAAGTGATTGAAGAAAAAGACCAGGTAGGAACGCTTGCTGACCAGAAACGATTACT
GGAAGAGCAGTGA

Upstream 100 bases:

>100_bases
GCTCTTATGATCCCTGCCTTGCATGTGCTATTCATACAATTGATAAAACTGAAAAGAATCCGGATCGCATAATCAGGGTG
GTTTAAAGGGGGATGAAAAT

Downstream 100 bases:

>100_bases
CGGTGATGGAAGAGAATCAGGTGATAAGAAAAAAGAACCTATCAAAAAAGAACCTATCTAAAAAAGAACCTATCAGCAGT
TGAAATCAGAGAAAAATAAT

Product: F420-nonreducing hydrogenase III subunit cytochrome B

Products: NA

Alternate protein names: Methanophenazine-Reducing Hydrogenase Cytochrome B Subunit

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MVRSAEKPASRRLVVERYTWLERVTHLVHLISMFVLLITGFKIYTGWGFMSFESARALHMIAVPFFLVANWLLVPYNIFS
CKEEHCSIGDRLYHFKESYLFGKDDAERLLDIIKNFFGKGEYPAFTVYDERKGHYVTKLHPGMKLLLIFESTAIVLVALT
GIVLYSLTWSPFGIPVSEWILSISWFFASMINMDGLALIRYLHLLAAYWFVLELIIHVGILELDPDAWKYHKAIFWSGNE
DLSDRHFVKVIEEKDQVGTLADQKRLLEEQ

Sequences:

>Translated_270_residues
MVRSAEKPASRRLVVERYTWLERVTHLVHLISMFVLLITGFKIYTGWGFMSFESARALHMIAVPFFLVANWLLVPYNIFS
CKEEHCSIGDRLYHFKESYLFGKDDAERLLDIIKNFFGKGEYPAFTVYDERKGHYVTKLHPGMKLLLIFESTAIVLVALT
GIVLYSLTWSPFGIPVSEWILSISWFFASMINMDGLALIRYLHLLAAYWFVLELIIHVGILELDPDAWKYHKAIFWSGNE
DLSDRHFVKVIEEKDQVGTLADQKRLLEEQ
>Mature_270_residues
MVRSAEKPASRRLVVERYTWLERVTHLVHLISMFVLLITGFKIYTGWGFMSFESARALHMIAVPFFLVANWLLVPYNIFS
CKEEHCSIGDRLYHFKESYLFGKDDAERLLDIIKNFFGKGEYPAFTVYDERKGHYVTKLHPGMKLLLIFESTAIVLVALT
GIVLYSLTWSPFGIPVSEWILSISWFFASMINMDGLALIRYLHLLAAYWFVLELIIHVGILELDPDAWKYHKAIFWSGNE
DLSDRHFVKVIEEKDQVGTLADQKRLLEEQ

Specific function: Unknown

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31433; Mature: 31433

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSAEKPASRRLVVERYTWLERVTHLVHLISMFVLLITGFKIYTGWGFMSFESARALHM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEHHHHHHHHH
IAVPFFLVANWLLVPYNIFSCKEEHCSIGDRLYHFKESYLFGKDDAERLLDIIKNFFGKG
HHHHHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
EYPAFTVYDERKGHYVTKLHPGMKLLLIFESTAIVLVALTGIVLYSLTWSPFGIPVSEWI
CCCEEEEEECCCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSISWFFASMINMDGLALIRYLHLLAAYWFVLELIIHVGILELDPDAWKYHKAIFWSGNE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHEEEEECCCC
DLSDRHFVKVIEEKDQVGTLADQKRLLEEQ
CCCHHHHHHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MVRSAEKPASRRLVVERYTWLERVTHLVHLISMFVLLITGFKIYTGWGFMSFESARALHM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEHHHHHHHHH
IAVPFFLVANWLLVPYNIFSCKEEHCSIGDRLYHFKESYLFGKDDAERLLDIIKNFFGKG
HHHHHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
EYPAFTVYDERKGHYVTKLHPGMKLLLIFESTAIVLVALTGIVLYSLTWSPFGIPVSEWI
CCCEEEEEECCCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSISWFFASMINMDGLALIRYLHLLAAYWFVLELIIHVGILELDPDAWKYHKAIFWSGNE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHEEEEECCCC
DLSDRHFVKVIEEKDQVGTLADQKRLLEEQ
CCCHHHHHHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA