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The map label for this gene is rpl19e [H]

Identifier: 21228244

GI number: 21228244

Start: 2547448

End: 2547909

Strand: Direct

Name: rpl19e [H]

Synonym: MM_2142

Alternate gene names: 21228244

Gene position: 2547448-2547909 (Clockwise)

Preceding gene: 21228243

Following gene: 161485668

Centisome position: 62.19

GC content: 48.92

Gene sequence:

>462_bases
GTGAGTAAGATGTCAGACCTGGCCAACCAGAGAAGACTGGCTTCCAAAGTTCTTGAGTGCGGGCTTGACAGAGTATGGCT
TAATCCTGAAGCTTCCGAAGAAATCGCTTCCGCAATTACAAGAGAAGACATCCGCGGACTCATTGAGAAAGGCGTCATTA
AAGCAAAGCCTGTAAAAGGGGTCAGCAGAGGCAGAGCCAGAGCTCTTGCTGCCAAGCGTAAGTATGGGCACTGCAAGGGG
CATGGTTCCAGAAAGGGTAAGAAAGGAGCCCGTACACCAAAGAAGGAACAGTGGATGAAAAAGATCCGGGCTCTTAGAAG
AAGACTCAAGGAGCTGCGCGCAGACGGAGCACTTGATAAGTCAGTGTACTGCAGACTCTATAGAAAGGCAAAAGGCGGAG
AATACAGAAGCGTTTCTCACCTGAACTCCCACCTTGAGTCCGAAAAACTGTTACAGAAATAA

Upstream 100 bases:

>100_bases
GAAGCAATAAGAATTGCAGGAAAGATCGGTGCAAAAAAGAAAGCTCTCATTATTGCAAAAGCCGAAGAAGCCGGGATTAA
AGTCCTGAACCCTGGAAGGA

Downstream 100 bases:

>100_bases
CCTGGAGGAGCTGAAAATGGCAACAGGACCAAGATATAAGGTTCCTTTTAGAAGAAGAAGAGAAGGACGCACCAATTACC
ACCTCCGCCTTAAATTACTA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSKMSDLANQRRLASKVLECGLDRVWLNPEASEEIASAITREDIRGLIEKGVIKAKPVKGVSRGRARALAAKRKYGHCKG
HGSRKGKKGARTPKKEQWMKKIRALRRRLKELRADGALDKSVYCRLYRKAKGGEYRSVSHLNSHLESEKLLQK

Sequences:

>Translated_153_residues
MSKMSDLANQRRLASKVLECGLDRVWLNPEASEEIASAITREDIRGLIEKGVIKAKPVKGVSRGRARALAAKRKYGHCKG
HGSRKGKKGARTPKKEQWMKKIRALRRRLKELRADGALDKSVYCRLYRKAKGGEYRSVSHLNSHLESEKLLQK
>Mature_152_residues
SKMSDLANQRRLASKVLECGLDRVWLNPEASEEIASAITREDIRGLIEKGVIKAKPVKGVSRGRARALAAKRKYGHCKGH
GSRKGKKGARTPKKEQWMKKIRALRRRLKELRADGALDKSVYCRLYRKAKGGEYRSVSHLNSHLESEKLLQK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=142, Percent_Identity=43.6619718309859, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17508673, Length=127, Percent_Identity=44.8818897637795, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6319559, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6319444, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45552831, Length=147, Percent_Identity=43.5374149659864, Blast_Score=107, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17136322, Length=147, Percent_Identity=43.5374149659864, Blast_Score=107, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17335; Mature: 17203

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMSDLANQRRLASKVLECGLDRVWLNPEASEEIASAITREDIRGLIEKGVIKAKPVKG
CCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSRGRARALAAKRKYGHCKGHGSRKGKKGARTPKKEQWMKKIRALRRRLKELRADGALDK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVYCRLYRKAKGGEYRSVSHLNSHLESEKLLQK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKMSDLANQRRLASKVLECGLDRVWLNPEASEEIASAITREDIRGLIEKGVIKAKPVKG
CHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VSRGRARALAAKRKYGHCKGHGSRKGKKGARTPKKEQWMKKIRALRRRLKELRADGALDK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVYCRLYRKAKGGEYRSVSHLNSHLESEKLLQK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]