| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228223
Identifier: 21228223
GI number: 21228223
Start: 2535233
End: 2535637
Strand: Direct
Name: 21228223
Synonym: MM_2121
Alternate gene names: NA
Gene position: 2535233-2535637 (Clockwise)
Preceding gene: 21228222
Following gene: 21228224
Centisome position: 61.89
GC content: 48.15
Gene sequence:
>405_bases GTGGCAAACAACGGGGAAGAAATCGGAGAAATACTTATCACCCCTCTTTCCAGGCTTCTGGGGGAAGTTGGGCGTTCTGT TGCTGAGACCCAGCGGGCTCTTGACATGAACTCCATAAAGACCCAGATAGAAATTGACGAAGAAAAAGCCCTCCGCGGAT ATGATATACAGGCTACATGGTATCATATCCCGGAGGTAGATCTTGAACTCAAAATGTCGCTAACTGTGAAGCTTGAAGAG GAAAGGGACTCCAGAAACCGGATCCGGGGCTACAGGCCTGTCCTCAACGCTTCCCCTCTCAATGCCTCGTATAACTCCCT TTACAGTTATGATGTTCAGGGCTCAAGCTGCATTAAAGCAAAAATAGTGTCCATACCTGCCTCTTCAAAGGTTAGGGAGG GATAA
Upstream 100 bases:
>100_bases AGTCGCGGCATGTAAGGCTTTAAATATACTTCTTGCATGATGTCTGCACTGATGTGTTTTTTCATATTCATTCCGAAACT TATTTAAAGGAGTTGTAATT
Downstream 100 bases:
>100_bases TGCCCTTTTAAGGAGACGCTCTTCCGGGAGGAACAAGATGACAAATATAGCTGATATAAAGAGCAACCTGGAAGCCTTCA GGAAAGCCGGGACAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MANNGEEIGEILITPLSRLLGEVGRSVAETQRALDMNSIKTQIEIDEEKALRGYDIQATWYHIPEVDLELKMSLTVKLEE ERDSRNRIRGYRPVLNASPLNASYNSLYSYDVQGSSCIKAKIVSIPASSKVREG
Sequences:
>Translated_134_residues MANNGEEIGEILITPLSRLLGEVGRSVAETQRALDMNSIKTQIEIDEEKALRGYDIQATWYHIPEVDLELKMSLTVKLEE ERDSRNRIRGYRPVLNASPLNASYNSLYSYDVQGSSCIKAKIVSIPASSKVREG >Mature_133_residues ANNGEEIGEILITPLSRLLGEVGRSVAETQRALDMNSIKTQIEIDEEKALRGYDIQATWYHIPEVDLELKMSLTVKLEEE RDSRNRIRGYRPVLNASPLNASYNSLYSYDVQGSSCIKAKIVSIPASSKVREG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15014; Mature: 14883
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNGEEIGEILITPLSRLLGEVGRSVAETQRALDMNSIKTQIEIDEEKALRGYDIQATW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCEEEE YHIPEVDLELKMSLTVKLEEERDSRNRIRGYRPVLNASPLNASYNSLYSYDVQGSSCIKA EECCCCCEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE KIVSIPASSKVREG EEEECCCCCCCCCC >Mature Secondary Structure ANNGEEIGEILITPLSRLLGEVGRSVAETQRALDMNSIKTQIEIDEEKALRGYDIQATW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCEEEE YHIPEVDLELKMSLTVKLEEERDSRNRIRGYRPVLNASPLNASYNSLYSYDVQGSSCIKA EECCCCCEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE KIVSIPASSKVREG EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA