| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228222
Identifier: 21228222
GI number: 21228222
Start: 2534493
End: 2535068
Strand: Direct
Name: 21228222
Synonym: MM_2120
Alternate gene names: NA
Gene position: 2534493-2535068 (Clockwise)
Preceding gene: 21228221
Following gene: 21228223
Centisome position: 61.87
GC content: 47.74
Gene sequence:
>576_bases ATGATTAAAGAAATGGCCCTTGCGATTGCAGAGGGACAGATGGCTCTGGACATGAATTCCGTGCAGGTTGCACAGGCCCT TGCAGGGACAAAGCTTGATGCCGGAAGCGTTGTAATGTACATTGAAGAGACAACGGACGCTGACGGCAACGTTACTGCGA GCGATGTTGTTACTAATGACCAGCCAATGTCGCTTCTGACTTACGGGCTTGAGCCTCGTTTTTACGAATTTACGGAATCT ATTATCGAGGTTAAGATGACGATCACCATGATGAGGGAATCGTCAACTGAGCTCACTTACGGCAGTGAGTTTAAGCTGAC CAATGAATCAAAGGTCACCGGCAGCATGGAATCAGGAGGGCTTGCAAAACTGCTCTTTGGAAAGAGCAAGGGGAGCATTG AAAACACAACAACCGTTGCTTATACTTCAACTTTTAATGCAAAATACAGTTCAAAATATTCTTTCAAAGAAGAAGGCACA AGCCTGCTGAGGACAACTTTGAGGCCTGTCCCTGCTCCTGAGAGGACAATTCCCAGGGTGACAGTCAAGCTTGCTGCCCC AGCCAGCCCGAACTGA
Upstream 100 bases:
>100_bases CATAAATGTATTAATTTTTTTACTCAGTTTTGTAAAATCTAAGGGGATAAATAATATGGTAAGTGTCGGTCAGGAACTAT TGAACGTTCCTTTTGGGGAA
Downstream 100 bases:
>100_bases AGTTTTCCGTAAAATGTTTCTTGCTGCAGTCAGGATGTTTTAATTAATATGAGGTTCTGACTGCAGTCGCGGCATGTAAG GCTTTAAATATACTTCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT SLLRTTLRPVPAPERTIPRVTVKLAAPASPN
Sequences:
>Translated_191_residues MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT SLLRTTLRPVPAPERTIPRVTVKLAAPASPN >Mature_191_residues MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT SLLRTTLRPVPAPERTIPRVTVKLAAPASPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20682; Mature: 20682
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTND CCHHHEEEEECCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHEECCC QPMSLLTYGLEPRFYEFTESIIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGG CCCEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCEEEECCCCCEECCCCCCC LAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGTSLLRTTLRPVPAPERTIPRV EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE TVKLAAPASPN EEEEECCCCCC >Mature Secondary Structure MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTND CCHHHEEEEECCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHEECCC QPMSLLTYGLEPRFYEFTESIIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGG CCCEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCEEEECCCCCEECCCCCCC LAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGTSLLRTTLRPVPAPERTIPRV EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE TVKLAAPASPN EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA