Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228222

Identifier: 21228222

GI number: 21228222

Start: 2534493

End: 2535068

Strand: Direct

Name: 21228222

Synonym: MM_2120

Alternate gene names: NA

Gene position: 2534493-2535068 (Clockwise)

Preceding gene: 21228221

Following gene: 21228223

Centisome position: 61.87

GC content: 47.74

Gene sequence:

>576_bases
ATGATTAAAGAAATGGCCCTTGCGATTGCAGAGGGACAGATGGCTCTGGACATGAATTCCGTGCAGGTTGCACAGGCCCT
TGCAGGGACAAAGCTTGATGCCGGAAGCGTTGTAATGTACATTGAAGAGACAACGGACGCTGACGGCAACGTTACTGCGA
GCGATGTTGTTACTAATGACCAGCCAATGTCGCTTCTGACTTACGGGCTTGAGCCTCGTTTTTACGAATTTACGGAATCT
ATTATCGAGGTTAAGATGACGATCACCATGATGAGGGAATCGTCAACTGAGCTCACTTACGGCAGTGAGTTTAAGCTGAC
CAATGAATCAAAGGTCACCGGCAGCATGGAATCAGGAGGGCTTGCAAAACTGCTCTTTGGAAAGAGCAAGGGGAGCATTG
AAAACACAACAACCGTTGCTTATACTTCAACTTTTAATGCAAAATACAGTTCAAAATATTCTTTCAAAGAAGAAGGCACA
AGCCTGCTGAGGACAACTTTGAGGCCTGTCCCTGCTCCTGAGAGGACAATTCCCAGGGTGACAGTCAAGCTTGCTGCCCC
AGCCAGCCCGAACTGA

Upstream 100 bases:

>100_bases
CATAAATGTATTAATTTTTTTACTCAGTTTTGTAAAATCTAAGGGGATAAATAATATGGTAAGTGTCGGTCAGGAACTAT
TGAACGTTCCTTTTGGGGAA

Downstream 100 bases:

>100_bases
AGTTTTCCGTAAAATGTTTCTTGCTGCAGTCAGGATGTTTTAATTAATATGAGGTTCTGACTGCAGTCGCGGCATGTAAG
GCTTTAAATATACTTCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES
IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT
SLLRTTLRPVPAPERTIPRVTVKLAAPASPN

Sequences:

>Translated_191_residues
MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES
IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT
SLLRTTLRPVPAPERTIPRVTVKLAAPASPN
>Mature_191_residues
MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTNDQPMSLLTYGLEPRFYEFTES
IIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGGLAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGT
SLLRTTLRPVPAPERTIPRVTVKLAAPASPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20682; Mature: 20682

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTND
CCHHHEEEEECCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHEECCC
QPMSLLTYGLEPRFYEFTESIIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGG
CCCEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCEEEECCCCCEECCCCCCC
LAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGTSLLRTTLRPVPAPERTIPRV
EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE
TVKLAAPASPN
EEEEECCCCCC
>Mature Secondary Structure
MIKEMALAIAEGQMALDMNSVQVAQALAGTKLDAGSVVMYIEETTDADGNVTASDVVTND
CCHHHEEEEECCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHEECCC
QPMSLLTYGLEPRFYEFTESIIEVKMTITMMRESSTELTYGSEFKLTNESKVTGSMESGG
CCCEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCEEEECCCCCEECCCCCCC
LAKLLFGKSKGSIENTTTVAYTSTFNAKYSSKYSFKEEGTSLLRTTLRPVPAPERTIPRV
EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE
TVKLAAPASPN
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA