Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228221

Identifier: 21228221

GI number: 21228221

Start: 2533190

End: 2533672

Strand: Direct

Name: 21228221

Synonym: MM_2119

Alternate gene names: NA

Gene position: 2533190-2533672 (Clockwise)

Preceding gene: 21228220

Following gene: 21228222

Centisome position: 61.84

GC content: 44.93

Gene sequence:

>483_bases
ATGGCCGGATCCGCAATGGCAGCTCCATTTGATCCAAGTCTCTTGAATGCAGCAGGTACTGCAGAGGCACCAAATCCTAT
AACTTTGGCTCCTGGACAATCTGTAGTTCTTAGCTTCAGAGGAACAGGCATTTTAGAGGAAGCTGTTGATACGGATTTAC
CTTATACTTCTACGGTTGCAGTAAAAGCTGGTTCTCCTGCCGAAGCAAAAACTACTGACATTACTGTTGGGTTTGTCCAT
CCGAATTTTCACCCAACCGCTAGCTCATACACTGATGTAGGAGTTATAACACTTACCAATAATGGGCCGGCTGGTGCAAG
TTACCTTGTTACAATTAAAGCTGGATCTGAAACTAGTATTGAATTTGGAGCAGCTTCGAGGACAGTAAACTCTCAGATTC
CAGAGTTCCCAACCGTTGCTCTCCCTGTAGCAGCAATCCTTGGATTAGTTTTCATCTTCGGGCGTAAGAAAGAAGGTCTG
TGA

Upstream 100 bases:

>100_bases
TTATAACTTTCCAAAAAAAATTAAGAAAATATCTGGAAAGTAGGGGTAGATTATGAAGAAAATTTTGTTACTAATAGTGA
GCGGTTTATTAATCGCCTGT

Downstream 100 bases:

>100_bases
TTTCCCTCCCAGCTCTTCTTTTCTTTAACTTTTTTTAATTTTTTTCTTTTTTTATTTATTAAATCCATTTCTAAATCTTT
CCGGAAACTCCTATTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAGSAMAAPFDPSLLNAAGTAEAPNPITLAPGQSVVLSFRGTGILEEAVDTDLPYTSTVAVKAGSPAEAKTTDITVGFVH
PNFHPTASSYTDVGVITLTNNGPAGASYLVTIKAGSETSIEFGAASRTVNSQIPEFPTVALPVAAILGLVFIFGRKKEGL

Sequences:

>Translated_160_residues
MAGSAMAAPFDPSLLNAAGTAEAPNPITLAPGQSVVLSFRGTGILEEAVDTDLPYTSTVAVKAGSPAEAKTTDITVGFVH
PNFHPTASSYTDVGVITLTNNGPAGASYLVTIKAGSETSIEFGAASRTVNSQIPEFPTVALPVAAILGLVFIFGRKKEGL
>Mature_159_residues
AGSAMAAPFDPSLLNAAGTAEAPNPITLAPGQSVVLSFRGTGILEEAVDTDLPYTSTVAVKAGSPAEAKTTDITVGFVHP
NFHPTASSYTDVGVITLTNNGPAGASYLVTIKAGSETSIEFGAASRTVNSQIPEFPTVALPVAAILGLVFIFGRKKEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16249; Mature: 16117

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSAMAAPFDPSLLNAAGTAEAPNPITLAPGQSVVLSFRGTGILEEAVDTDLPYTSTVA
CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHCCCCCCCEEEE
VKAGSPAEAKTTDITVGFVHPNFHPTASSYTDVGVITLTNNGPAGASYLVTIKAGSETSI
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE
EFGAASRTVNSQIPEFPTVALPVAAILGLVFIFGRKKEGL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGSAMAAPFDPSLLNAAGTAEAPNPITLAPGQSVVLSFRGTGILEEAVDTDLPYTSTVA
CCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHCCCCCCCEEEE
VKAGSPAEAKTTDITVGFVHPNFHPTASSYTDVGVITLTNNGPAGASYLVTIKAGSETSI
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE
EFGAASRTVNSQIPEFPTVALPVAAILGLVFIFGRKKEGL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA