Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228207

Identifier: 21228207

GI number: 21228207

Start: 2516177

End: 2517307

Strand: Reverse

Name: 21228207

Synonym: MM_2105

Alternate gene names: NA

Gene position: 2517307-2516177 (Counterclockwise)

Preceding gene: 21228208

Following gene: 21228206

Centisome position: 61.45

GC content: 28.29

Gene sequence:

>1131_bases
ATGCCCCAAAATAATTTTAGAAAATGTATACTTTCCATTTGCGATATATCTCCAACTAAATTTGGTTCTTTTGAAGAATT
TATCGTATCACTTACTGAAAAATTAAGAAAAGATGACTTTGAACACATTATAGTTTTCAGAGCTAAACCGATAAAGAGCG
TAGAAGATTCCCTATTAAATTTAGGTGCGAAAATAGAGATTATTAAACCATCAAAAAGCAATATATATAATTTTATTATA
TTTTATAAATATATAAAGAAGAACAAACCTGATATAGTCCATTTTCACTTTTATCCTATTTACACGGTTGTGAATTACTT
AAAATTATTTTTCAATATAAGGATAGTATATACAGACCATATGGGGGGAAAAAAAGCAAAAAAATTCTCAAAGAAATTAT
TACGTAAGATTTACTATTTTACTAACTCGAAGTTATTTAGTAGTGGAATCGATAAAATCATTTGTGTATCAAATTTTGTA
AAATCTAAGTATTCGAGAGAGTATGGAATAGATTCGGAGAAGTTATATACCATTTATAATGGCATTAACATGGAGAAGTT
CCAAAAAAATACAAACACCGAAGATATAAAAAGAAAATTTAATCTAAAAGATGAGTTTGTGATCACATGTGTAGGACTAA
GGAGAGACAAAGGTCCTCATTATCTAATTAAAGCGGCTCCTTCGATATTAAAAGAAATACCTAATACAAAATTTATATTA
GTTGGAGAAGGGGAATGCAAAGACCGCATAGAGTCATTAATAGAAAAATTAGACATAAAAGATAAAGTGATGTTAGTAGG
GAACGTACCGAATTTAGCAGAAGTATATAGTATATCATCGTGTGTAGTAATCCCTTCTTTGTTTGAAGAAGCTTTTTGTT
TTGTTGCAGCTGAAGCAATGTCAATAGAAGCTCCTATTGTAGCATTTGATTCAGGAGCCATTAAAGAAATAATTTACAAA
AAAGAAAGCGTAGTATCTAGAAGTTCCAAATTATTATCTCAAAAGATAATAGAATGTTTTAAAAATGGAGATATTTCTAC
AAAAGGTTCGAGAGAATATGTATGTAGAAACTTCTCAATTAACAAGAATATCTGTACTCACGTTGAACTATATAATAAAT
TGTTAAAGTAA

Upstream 100 bases:

>100_bases
TTTGAGATAAAAAATAACTATAAATCTTTTTCTGAAACTCTAAGTTCATCCCTGGAATATGCAGTAAAATAAACCGAAAG
TGTTGGAAGAGGTAAGATTG

Downstream 100 bases:

>100_bases
CACGATAGAGAATTATATAACAGGTCATCGCTCAAACAACTTCACAATATTCGAACCGAATGAAATGATAGTAACAATGT
AAGTAACAAGCCAAATATCT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPQNNFRKCILSICDISPTKFGSFEEFIVSLTEKLRKDDFEHIIVFRAKPIKSVEDSLLNLGAKIEIIKPSKSNIYNFII
FYKYIKKNKPDIVHFHFYPIYTVVNYLKLFFNIRIVYTDHMGGKKAKKFSKKLLRKIYYFTNSKLFSSGIDKIICVSNFV
KSKYSREYGIDSEKLYTIYNGINMEKFQKNTNTEDIKRKFNLKDEFVITCVGLRRDKGPHYLIKAAPSILKEIPNTKFIL
VGEGECKDRIESLIEKLDIKDKVMLVGNVPNLAEVYSISSCVVIPSLFEEAFCFVAAEAMSIEAPIVAFDSGAIKEIIYK
KESVVSRSSKLLSQKIIECFKNGDISTKGSREYVCRNFSINKNICTHVELYNKLLK

Sequences:

>Translated_376_residues
MPQNNFRKCILSICDISPTKFGSFEEFIVSLTEKLRKDDFEHIIVFRAKPIKSVEDSLLNLGAKIEIIKPSKSNIYNFII
FYKYIKKNKPDIVHFHFYPIYTVVNYLKLFFNIRIVYTDHMGGKKAKKFSKKLLRKIYYFTNSKLFSSGIDKIICVSNFV
KSKYSREYGIDSEKLYTIYNGINMEKFQKNTNTEDIKRKFNLKDEFVITCVGLRRDKGPHYLIKAAPSILKEIPNTKFIL
VGEGECKDRIESLIEKLDIKDKVMLVGNVPNLAEVYSISSCVVIPSLFEEAFCFVAAEAMSIEAPIVAFDSGAIKEIIYK
KESVVSRSSKLLSQKIIECFKNGDISTKGSREYVCRNFSINKNICTHVELYNKLLK
>Mature_375_residues
PQNNFRKCILSICDISPTKFGSFEEFIVSLTEKLRKDDFEHIIVFRAKPIKSVEDSLLNLGAKIEIIKPSKSNIYNFIIF
YKYIKKNKPDIVHFHFYPIYTVVNYLKLFFNIRIVYTDHMGGKKAKKFSKKLLRKIYYFTNSKLFSSGIDKIICVSNFVK
SKYSREYGIDSEKLYTIYNGINMEKFQKNTNTEDIKRKFNLKDEFVITCVGLRRDKGPHYLIKAAPSILKEIPNTKFILV
GEGECKDRIESLIEKLDIKDKVMLVGNVPNLAEVYSISSCVVIPSLFEEAFCFVAAEAMSIEAPIVAFDSGAIKEIIYKK
ESVVSRSSKLLSQKIIECFKNGDISTKGSREYVCRNFSINKNICTHVELYNKLLK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI9755344, Length=224, Percent_Identity=26.3392857142857, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43395; Mature: 43264

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQNNFRKCILSICDISPTKFGSFEEFIVSLTEKLRKDDFEHIIVFRAKPIKSVEDSLLN
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHC
LGAKIEIIKPSKSNIYNFIIFYKYIKKNKPDIVHFHFYPIYTVVNYLKLFFNIRIVYTDH
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHEEEEEEEEC
MGGKKAKKFSKKLLRKIYYFTNSKLFSSGIDKIICVSNFVKSKYSREYGIDSEKLYTIYN
CCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEC
GINMEKFQKNTNTEDIKRKFNLKDEFVITCVGLRRDKGPHYLIKAAPSILKEIPNTKFIL
CCCHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEE
VGEGECKDRIESLIEKLDIKDKVMLVGNVPNLAEVYSISSCVVIPSLFEEAFCFVAAEAM
EECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SIEAPIVAFDSGAIKEIIYKKESVVSRSSKLLSQKIIECFKNGDISTKGSREYVCRNFSI
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCC
NKNICTHVELYNKLLK
CCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PQNNFRKCILSICDISPTKFGSFEEFIVSLTEKLRKDDFEHIIVFRAKPIKSVEDSLLN
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHC
LGAKIEIIKPSKSNIYNFIIFYKYIKKNKPDIVHFHFYPIYTVVNYLKLFFNIRIVYTDH
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHEEEEEEEEC
MGGKKAKKFSKKLLRKIYYFTNSKLFSSGIDKIICVSNFVKSKYSREYGIDSEKLYTIYN
CCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEC
GINMEKFQKNTNTEDIKRKFNLKDEFVITCVGLRRDKGPHYLIKAAPSILKEIPNTKFIL
CCCHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEE
VGEGECKDRIESLIEKLDIKDKVMLVGNVPNLAEVYSISSCVVIPSLFEEAFCFVAAEAM
EECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SIEAPIVAFDSGAIKEIIYKKESVVSRSSKLLSQKIIECFKNGDISTKGSREYVCRNFSI
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCC
NKNICTHVELYNKLLK
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]