Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228206

Identifier: 21228206

GI number: 21228206

Start: 2514931

End: 2516019

Strand: Reverse

Name: 21228206

Synonym: MM_2104

Alternate gene names: NA

Gene position: 2516019-2514931 (Counterclockwise)

Preceding gene: 21228207

Following gene: 21228205

Centisome position: 61.42

GC content: 24.43

Gene sequence:

>1089_bases
ATGAATTTTTTTGTAGATAATATATATATTTACATCTTCCCATATTTAATAATACCTTTTTTTATATTTTATAGGCTGAA
AATATATCATACAAAATTATATAATTTTGAATTTTTGTCTAAAGGGAATACAGATCGAATAAGAGGCTTATTAGCACTTG
TAGTGATTTTACATCACGTTGCTCAAAGAATGGATAACGTAGGTTTAATGTTACCTTTTTGTCAGGCAGGAAGCTATGCT
GTCAGTATATTCTTATTTTTTTCAGGCTATGGATTAATGACCTCAAGTTTAAAAAATCCAAATTATTTCAAAAATTTTTT
TTGTAAAAGAATCTCAAAGGTATACATCCCTTTTTTAATAATAAACATCTTTACCTTATCAATATATCAATTGACATTTA
ATTCTGAATATAGTCTCATAGACAAGTTATTTTACACTACAGGTATCAAACTTATCGATTCTGTAACTTGGTATATAATA
ATTACATTAGTATTTTATGTAATATTTTATATTCTGTTTAAAAATAATCAAATTAACGTAGCGGTCAGGAGATTATTTAT
TTATTCATTAATTTTTTATTTTAGCTGTTACATTATAAAAATCGGAAGTTGGTGGTATATAAATTCATTTAGTTTTCCAA
TTGGAATATATACAGCGATCAACTTTAACAAGATATGCAGCTATATAGAAAAGAACTATACTAAATATACGATCTTTTTC
ATATTAAGTTTTGGTATCTTAAGCTCTGGGATTGCGTCTTTTTTATTGTATCAAGTTTTTCATTTTCACTTTAAAGTAAT
AATTGAAACATTATCTTCCATTCTTTTCCTACCAGTAGTCCTATTACTTTTATTAAAGGTAGATCTACGGCACAATTTTT
TAAACTTCTTTGGAGATATTTCTTATGAGATGTATCTCATACACATGAAAATTTATATCATATTAGGAGAGTTCCTCCAA
ATAAATAAAAGTTATAACATACTTGTTTATTTTATAATAGTTATAATGTTGTCAAAAGGAATATTATTATTTGAAAAACT
TTTACTAAAAACAATACATAAAAATACTTACGTCATTAAATATACCTAA

Upstream 100 bases:

>100_bases
GAATGAAATGATAGTAACAATGTAAGTAACAAGCCAAATATCTAGATACGATATGGGCCACTGAGGAAAATACTTGCGTT
TTACAGAGGTGGCGAAAAAT

Downstream 100 bases:

>100_bases
TCTTACAGCAACAATTATCTGCTTTATAGTGTCAGGTAGCGTTTGTAAGCTATTTATCGAGATGGCAAAAACTCAGAATC
ATGTACTAAACCTCGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNFFVDNIYIYIFPYLIIPFFIFYRLKIYHTKLYNFEFLSKGNTDRIRGLLALVVILHHVAQRMDNVGLMLPFCQAGSYA
VSIFLFFSGYGLMTSSLKNPNYFKNFFCKRISKVYIPFLIINIFTLSIYQLTFNSEYSLIDKLFYTTGIKLIDSVTWYII
ITLVFYVIFYILFKNNQINVAVRRLFIYSLIFYFSCYIIKIGSWWYINSFSFPIGIYTAINFNKICSYIEKNYTKYTIFF
ILSFGILSSGIASFLLYQVFHFHFKVIIETLSSILFLPVVLLLLLKVDLRHNFLNFFGDISYEMYLIHMKIYIILGEFLQ
INKSYNILVYFIIVIMLSKGILLFEKLLLKTIHKNTYVIKYT

Sequences:

>Translated_362_residues
MNFFVDNIYIYIFPYLIIPFFIFYRLKIYHTKLYNFEFLSKGNTDRIRGLLALVVILHHVAQRMDNVGLMLPFCQAGSYA
VSIFLFFSGYGLMTSSLKNPNYFKNFFCKRISKVYIPFLIINIFTLSIYQLTFNSEYSLIDKLFYTTGIKLIDSVTWYII
ITLVFYVIFYILFKNNQINVAVRRLFIYSLIFYFSCYIIKIGSWWYINSFSFPIGIYTAINFNKICSYIEKNYTKYTIFF
ILSFGILSSGIASFLLYQVFHFHFKVIIETLSSILFLPVVLLLLLKVDLRHNFLNFFGDISYEMYLIHMKIYIILGEFLQ
INKSYNILVYFIIVIMLSKGILLFEKLLLKTIHKNTYVIKYT
>Mature_362_residues
MNFFVDNIYIYIFPYLIIPFFIFYRLKIYHTKLYNFEFLSKGNTDRIRGLLALVVILHHVAQRMDNVGLMLPFCQAGSYA
VSIFLFFSGYGLMTSSLKNPNYFKNFFCKRISKVYIPFLIINIFTLSIYQLTFNSEYSLIDKLFYTTGIKLIDSVTWYII
ITLVFYVIFYILFKNNQINVAVRRLFIYSLIFYFSCYIIKIGSWWYINSFSFPIGIYTAINFNKICSYIEKNYTKYTIFF
ILSFGILSSGIASFLLYQVFHFHFKVIIETLSSILFLPVVLLLLLKVDLRHNFLNFFGDISYEMYLIHMKIYIILGEFLQ
INKSYNILVYFIIVIMLSKGILLFEKLLLKTIHKNTYVIKYT

Specific function: Unknown

COG id: COG3936

COG function: function code G; Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43090; Mature: 43090

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFVDNIYIYIFPYLIIPFFIFYRLKIYHTKLYNFEFLSKGNTDRIRGLLALVVILHHV
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCCHHHHHHHHHHHHHHHHH
AQRMDNVGLMLPFCQAGSYAVSIFLFFSGYGLMTSSLKNPNYFKNFFCKRISKVYIPFLI
HHHHCCCCEEEEHHCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
INIFTLSIYQLTFNSEYSLIDKLFYTTGIKLIDSVTWYIIITLVFYVIFYILFKNNQINV
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVRRLFIYSLIFYFSCYIIKIGSWWYINSFSFPIGIYTAINFNKICSYIEKNYTKYTIFF
HHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCEEEECCHHHHHHHHHHCCCHHHHHH
ILSFGILSSGIASFLLYQVFHFHFKVIIETLSSILFLPVVLLLLLKVDLRHNFLNFFGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYEMYLIHMKIYIILGEFLQINKSYNILVYFIIVIMLSKGILLFEKLLLKTIHKNTYVIK
CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
YT
EC
>Mature Secondary Structure
MNFFVDNIYIYIFPYLIIPFFIFYRLKIYHTKLYNFEFLSKGNTDRIRGLLALVVILHHV
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCCHHHHHHHHHHHHHHHHH
AQRMDNVGLMLPFCQAGSYAVSIFLFFSGYGLMTSSLKNPNYFKNFFCKRISKVYIPFLI
HHHHCCCCEEEEHHCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
INIFTLSIYQLTFNSEYSLIDKLFYTTGIKLIDSVTWYIIITLVFYVIFYILFKNNQINV
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVRRLFIYSLIFYFSCYIIKIGSWWYINSFSFPIGIYTAINFNKICSYIEKNYTKYTIFF
HHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCEEEECCHHHHHHHHHHCCCHHHHHH
ILSFGILSSGIASFLLYQVFHFHFKVIIETLSSILFLPVVLLLLLKVDLRHNFLNFFGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYEMYLIHMKIYIILGEFLQINKSYNILVYFIIVIMLSKGILLFEKLLLKTIHKNTYVIK
CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
YT
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA