Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is iorB [H]

Identifier: 21228196

GI number: 21228196

Start: 2500178

End: 2500780

Strand: Direct

Name: iorB [H]

Synonym: MM_2094

Alternate gene names: 21228196

Gene position: 2500178-2500780 (Clockwise)

Preceding gene: 21228195

Following gene: 21228198

Centisome position: 61.03

GC content: 49.25

Gene sequence:

>603_bases
ATGAGCGAAAGAGCAGGAGAGAAGAAACTCGACCTCCTTATCACAGGGGTCGGCGGTCAGGGAGCAATCCTTGCCTCGGA
TATCATTGGAAAAGCTGCAGTCATTTCAGGCATCCCTATCAGAGCAGCCGAGACTCACGGCATGGCACAGCGTGGAGGTT
CGGTTGTAAACCACATCAGGCTGGGCTCTGACCTGGGCTCAATGATCCCTAAAAAGGGTGCGGATATCATGCTTGCCCTT
GAGCCAATGGAAGCTGTCCGGTATCTTGATTTCCTGAAGGACGGCGGAGTAATTATAGTAAACACACAGTCAATTATTCC
CGTCACTGTGACCTCGGGCCTTTCAAAGTACCCTGAGGTTCAGGAAATCCTTGACGCCCTTTCTGAAAAATATGTTGTTA
AAGCCTTTAATGCAGACGAACTGGCTCATGAAGCCGGGAGCAGGCTTGCAATGAATGTGGCAATGGTCGGGGCAGTTTCC
GGCTACCTGCCCATTTCGAAAGAAGTTCTGCTTGAGAGTGTTAAAGTCCTTGTGCCAAAGAAGACGATTGAGATTAATAT
CAGGGCTTTTGAGATGGGAAGAGAGGAAGTAGAGGAAAGCTAA

Upstream 100 bases:

>100_bases
TTGACGAAGAAAATAAGTGTGCTGTAATCACTTCCCTGTGCAGCGGGTGTGGAGTCTGTGCGCAGATATGCAAATTTGAT
GCTATCCGGGAGGTGAAGAG

Downstream 100 bases:

>100_bases
AGCTTTCCTTTTTTCTTATAAACAGTTAAGTTGCTATTTTCCCTGTTTTTTAGTTTTTTACCTTTTTATTTTTATTTTTT
AATTTTGATTTTAATCTGCG

Product: indolepyruvate oxidoreductase subunit beta

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLAL
EPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVS
GYLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES

Sequences:

>Translated_200_residues
MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLAL
EPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVS
GYLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES
>Mature_199_residues
SERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLALE
PMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSG
YLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017719
- InterPro:   IPR019752
- InterPro:   IPR002869 [H]

Pfam domain/function: PF01558 POR [H]

EC number: =1.2.7.8 [H]

Molecular weight: Translated: 21255; Mature: 21124

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIR
CCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEHHHCCHHHHCCHHHHHEE
LGSDLGSMIPKKGADIMLALEPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEV
CCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCH
QEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSGYLPISKEVLLESVKVLVPK
HHHHHHHHHHHEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
KTIEINIRAFEMGREEVEES
EEEEEEEEEEECCHHHHCCC
>Mature Secondary Structure 
SERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIR
CCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEHHHCCHHHHCCHHHHHEE
LGSDLGSMIPKKGADIMLALEPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEV
CCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCH
QEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSGYLPISKEVLLESVKVLVPK
HHHHHHHHHHHEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
KTIEINIRAFEMGREEVEES
EEEEEEEEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]