| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is iorB [H]
Identifier: 21228196
GI number: 21228196
Start: 2500178
End: 2500780
Strand: Direct
Name: iorB [H]
Synonym: MM_2094
Alternate gene names: 21228196
Gene position: 2500178-2500780 (Clockwise)
Preceding gene: 21228195
Following gene: 21228198
Centisome position: 61.03
GC content: 49.25
Gene sequence:
>603_bases ATGAGCGAAAGAGCAGGAGAGAAGAAACTCGACCTCCTTATCACAGGGGTCGGCGGTCAGGGAGCAATCCTTGCCTCGGA TATCATTGGAAAAGCTGCAGTCATTTCAGGCATCCCTATCAGAGCAGCCGAGACTCACGGCATGGCACAGCGTGGAGGTT CGGTTGTAAACCACATCAGGCTGGGCTCTGACCTGGGCTCAATGATCCCTAAAAAGGGTGCGGATATCATGCTTGCCCTT GAGCCAATGGAAGCTGTCCGGTATCTTGATTTCCTGAAGGACGGCGGAGTAATTATAGTAAACACACAGTCAATTATTCC CGTCACTGTGACCTCGGGCCTTTCAAAGTACCCTGAGGTTCAGGAAATCCTTGACGCCCTTTCTGAAAAATATGTTGTTA AAGCCTTTAATGCAGACGAACTGGCTCATGAAGCCGGGAGCAGGCTTGCAATGAATGTGGCAATGGTCGGGGCAGTTTCC GGCTACCTGCCCATTTCGAAAGAAGTTCTGCTTGAGAGTGTTAAAGTCCTTGTGCCAAAGAAGACGATTGAGATTAATAT CAGGGCTTTTGAGATGGGAAGAGAGGAAGTAGAGGAAAGCTAA
Upstream 100 bases:
>100_bases TTGACGAAGAAAATAAGTGTGCTGTAATCACTTCCCTGTGCAGCGGGTGTGGAGTCTGTGCGCAGATATGCAAATTTGAT GCTATCCGGGAGGTGAAGAG
Downstream 100 bases:
>100_bases AGCTTTCCTTTTTTCTTATAAACAGTTAAGTTGCTATTTTCCCTGTTTTTTAGTTTTTTACCTTTTTATTTTTATTTTTT AATTTTGATTTTAATCTGCG
Product: indolepyruvate oxidoreductase subunit beta
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLAL EPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVS GYLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES
Sequences:
>Translated_200_residues MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLAL EPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVS GYLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES >Mature_199_residues SERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIRLGSDLGSMIPKKGADIMLALE PMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEVQEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSG YLPISKEVLLESVKVLVPKKTIEINIRAFEMGREEVEES
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 21255; Mature: 21124
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIR CCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEHHHCCHHHHCCHHHHHEE LGSDLGSMIPKKGADIMLALEPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEV CCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCH QEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSGYLPISKEVLLESVKVLVPK HHHHHHHHHHHEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC KTIEINIRAFEMGREEVEES EEEEEEEEEEECCHHHHCCC >Mature Secondary Structure SERAGEKKLDLLITGVGGQGAILASDIIGKAAVISGIPIRAAETHGMAQRGGSVVNHIR CCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEHHHCCHHHHCCHHHHHEE LGSDLGSMIPKKGADIMLALEPMEAVRYLDFLKDGGVIIVNTQSIIPVTVTSGLSKYPEV CCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCH QEILDALSEKYVVKAFNADELAHEAGSRLAMNVAMVGAVSGYLPISKEVLLESVKVLVPK HHHHHHHHHHHEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC KTIEINIRAFEMGREEVEES EEEEEEEEEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]