Click here to switch to the map view.

The map label for this gene is rps8e [H]

Identifier: 21228141

GI number: 21228141

Start: 2436779

End: 2437156

Strand: Direct

Name: rps8e [H]

Synonym: MM_2039

Alternate gene names: 21228141

Gene position: 2436779-2437156 (Clockwise)

Preceding gene: 21228136

Following gene: 21228142

Centisome position: 59.49

GC content: 46.83

Gene sequence:

>378_bases
ATGAGATGGCAAGGCAGCTCCAGAAGAAAGGCTACCGGCGGGAAGATTATTGCTGCCCGCGGAAAGCGCAAGTTTGAAAT
GGGCCGCGAATCTGCGGAGACCCGTATCAGTGATGTAAAGAGAAAGAACGTTCACACCATGGGCGGTAACAGGAAAGTAA
GACTCCTCCAGTCAAATGTTGCAAACATTACCAACCCAAAAGACGGAAAAACAGTTACTGCAACAATCGAGACAGTAATT
GACAATACCGCTAACAAGCACTATGTCAGGCGTAATATTCTGACAAAAGGTTCCGTTATAAGGACTCCCGTGGGAACTGC
CAGAGTTACAAGCAGACCCGGGCAGGATGGAGTTATAAACGCTGTATTAATCGAATAA

Upstream 100 bases:

>100_bases
GATCATTCAAAGTCACGTCAAATATCGGCAGAATAACAATGAAAATAACGTTGAATAAAAGTCTATACTTATATTTCAAT
AAAATAATGAGGTTTTAATA

Downstream 100 bases:

>100_bases
TTGAAGAGAGCCCTGACCCCAGACCGGGGTTCTGTGCCTATTCTTCCCAAACTTTGTGCCGGTGGTCAATATGGATGAAA
TGATTCAACATATACTGGAA

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRWQGSSRRKATGGKIIAARGKRKFEMGRESAETRISDVKRKNVHTMGGNRKVRLLQSNVANITNPKDGKTVTATIETVI
DNTANKHYVRRNILTKGSVIRTPVGTARVTSRPGQDGVINAVLIE

Sequences:

>Translated_125_residues
MRWQGSSRRKATGGKIIAARGKRKFEMGRESAETRISDVKRKNVHTMGGNRKVRLLQSNVANITNPKDGKTVTATIETVI
DNTANKHYVRRNILTKGSVIRTPVGTARVTSRPGQDGVINAVLIE
>Mature_125_residues
MRWQGSSRRKATGGKIIAARGKRKFEMGRESAETRISDVKRKNVHTMGGNRKVRLLQSNVANITNPKDGKTVTATIETVI
DNTANKHYVRRNILTKGSVIRTPVGTARVTSRPGQDGVINAVLIE

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320949, Length=100, Percent_Identity=37, Blast_Score=61, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6319399, Length=100, Percent_Identity=37, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283 [H]

Pfam domain/function: PF01201 Ribosomal_S8e [H]

EC number: NA

Molecular weight: Translated: 13766; Mature: 13766

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGSSRRKATGGKIIAARGKRKFEMGRESAETRISDVKRKNVHTMGGNRKVRLLQSNV
CCCCCCCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCEECCCCCEEEEEECCC
ANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIRTPVGTARVTSRPGQDGVIN
CCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCCCCCEEECCCCCCEECCCCCCCCCEE
AVLIE
EEEEC
>Mature Secondary Structure
MRWQGSSRRKATGGKIIAARGKRKFEMGRESAETRISDVKRKNVHTMGGNRKVRLLQSNV
CCCCCCCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCEECCCCCEEEEEECCC
ANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIRTPVGTARVTSRPGQDGVIN
CCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCCCCCEEECCCCCCEECCCCCCCCCEE
AVLIE
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]