Click here to switch to the map view.

The map label for this gene is 21228136

Identifier: 21228136

GI number: 21228136

Start: 2430902

End: 2433034

Strand: Direct

Name: 21228136

Synonym: MM_2034

Alternate gene names: NA

Gene position: 2430902-2433034 (Clockwise)

Preceding gene: 21228133

Following gene: 21228141

Centisome position: 59.34

GC content: 46.93

Gene sequence:

>2133_bases
ATGAGTAAAGAATGTCCAGACTGCCACGGGCGTGGCTACGAAGTTATCTCAACTGAGGTCTGCCCTCTTTGTAAGGGGAA
AGGCAAGTCAAAATCAGTTGATTTCATGAAAATTTCAGAAAAAGATATTGACAGTTTTTTGAAAAATGGCGCAGTATGTG
AAAAATGCAAAGGCAAGGGAAGTATCGAAATTACCAGACCCTGTGAAGCCTGTGAAGGGCTTGGAAAAATCTATACCTGC
AAGGTTTGTGGAGCAAGGATTCATAACCCGGAGGATGCAGAAGACGAAATTTGCAGTACATGTGCACGTTCCCAGCATGT
ATATGCTCTGGACGAGTCCTGTGACCTTAAAGATGTTGAAGCAGGCAAATTGTATCACGGCATAGTGAGCAGTATTGCTT
CTTTTGGAGTCTTCGTGGATTTAAATCCTCATGTGAGAGGGCTTATGCATTCCAGCAATGTCGGAGTCCAGCCTGAAGTC
GGGGATGCTGTAATTGTTCTTGTAAAAAGCATTAAAGCCGGAGGAAAACTGGACCTTATCCCCAAAACTCTTGCAAAATA
CGAGACCATAGAACTTGAAAAAGAACTCCCGCTTAAGGACTCCTCCCAGATTGACACCAGTATGAAAGGCAGGCTCATAA
GGATCGAGGGAGAGGTTATTCAGGTAAAACAGACCAGCGGGCCGACAATCTTCACCATAAGCGATGAAGGTGGCTTTATC
CCATGTGCCGCTTTTGAAAGCGCAGGGAAGCGTTCTTACCCTCATATCGATGTGGGGATGATCGTGTCGATTACAGGGGA
AGTGACTCCAAGGGACGAGCAGGTCCAGATCGAAGTCATGAGCATGAAACTGCTGACCGGAGAAAAAGAGGCTGTTGTCA
AGACCAGGGTTGAGAAGGTAATAGACGAGAAAGCAGCACCTGCTGATATTCCTTTCCTGATCGAAAGCGAAATTCTGGAA
AAGCTCAGGCCTAGAATGCTCCATGTCGCAAAAGAGATCAAAAAGGCAATCCTTCATTCAACACCTATTCTTCTCAGGCA
CCATGCTGATGCGGATGGGATCACTTCTGCAATCGCCATTGAGCGGGCAATTCTTCCCCTTATTACAGAAATTGGCGGGT
CGGATGCAGAATATTATTTCTATAAACGCGCCCCATCAAAAGCTCCTTTTTATGAACTTGCCGATGTGACAAGAGACATT
TCCTTTGCTCTTGAAGATTATGCCAGGCACGGGCAAAAGATGCCTCTTGTTATCCAGGTAGACAACGGCTCCACTGAAGA
AGACGTGCCCGCAATGCGGCAGGCGAATGTCTATGGCATCGACATGCTTGTGATTGACCACCACCACCCTGACGACATCG
TTGACCAGTACCTTATAGGGCATGTCAACCCTGCCCATGTAGGAGGAGATTTCGGAGTTACTGCAGGCATGCTGTGTGCC
GAGGTCGCCCGTATGATCAACCCGAATATCAGTGATACGATAAAGCACCTTCCTGCTGTTTCCGCAGTTGGAGACCGTTC
TGAAGCTCCTGAGGCTGAAAGATACATATCTCTTGTCTCGGACCGATATACCCTTGAGGAGTTAAAAGAAATGGCTCTGG
CTCTGGATTATGAGCAGTTCTGGCTTAAATTCAGCAGCGGAAAAGGCCTTATTGACGATATCCTGGACCTTGGCGACCAT
ACCATCCATAAAAACCTTGTCTCTCTGCTCTGTGAACAGGCAAACGCCATGATAAAAGAACAGCTTGAGACCTGCCTCTT
CAATGTCAAGTCCCAGAAGCTGTCTAATGGAGCTATTATGAATGTAATAGATGTCGAAAACTATGCCCAGAAGTTTACTT
TCCCGCCTCCAGGCAAGACTTCGGGTGAAGTTCATGACGTGCTCACCAAAAAGTACCCGGATAAGCCTGTTGTCACTATC
GGTTACGGGCCTGACTTTGCTGTCATCCGTTCAAAAGGCGTGCTCATGAATATCCCAAAGATTGTGAGGGAACTCCGTGA
AGACATAAAAGGAGCCGGAGTAAACGGAGGTGGACACCTTGTTGTCGGGAGTATCAAGTTTGTCGAAGGGATGAGAACCG
AAGTGCTCTCAAGGCTCGCAGAAAAGATCGCATCTGCGGAAGTTGTGTATTAA

Upstream 100 bases:

>100_bases
AGAATATAATGAGTACATGGAATTCAGGCAGGATTTGAATTCCAAATAAGTGTAAAATTAAGAAAACGCAGGTTCGGAAG
GACCACTGGTGTTGATATTA

Downstream 100 bases:

>100_bases
CAGGCCTTTTCAATAACCTGTTAATCTTTATCTTTCTCATCTCTTTTGACAGTGAAAACAAAAAAAGCCTCATTAAGAAG
TGTGGCAGATGTAAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MSKECPDCHGRGYEVISTEVCPLCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKGSIEITRPCEACEGLGKIYTC
KVCGARIHNPEDAEDEICSTCARSQHVYALDESCDLKDVEAGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEV
GDAVIVLVKSIKAGGKLDLIPKTLAKYETIELEKELPLKDSSQIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFI
PCAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKVIDEKAAPADIPFLIESEILE
KLRPRMLHVAKEIKKAILHSTPILLRHHADADGITSAIAIERAILPLITEIGGSDAEYYFYKRAPSKAPFYELADVTRDI
SFALEDYARHGQKMPLVIQVDNGSTEEDVPAMRQANVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCA
EVARMINPNISDTIKHLPAVSAVGDRSEAPEAERYISLVSDRYTLEELKEMALALDYEQFWLKFSSGKGLIDDILDLGDH
TIHKNLVSLLCEQANAMIKEQLETCLFNVKSQKLSNGAIMNVIDVENYAQKFTFPPPGKTSGEVHDVLTKKYPDKPVVTI
GYGPDFAVIRSKGVLMNIPKIVRELREDIKGAGVNGGGHLVVGSIKFVEGMRTEVLSRLAEKIASAEVVY

Sequences:

>Translated_710_residues
MSKECPDCHGRGYEVISTEVCPLCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKGSIEITRPCEACEGLGKIYTC
KVCGARIHNPEDAEDEICSTCARSQHVYALDESCDLKDVEAGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEV
GDAVIVLVKSIKAGGKLDLIPKTLAKYETIELEKELPLKDSSQIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFI
PCAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKVIDEKAAPADIPFLIESEILE
KLRPRMLHVAKEIKKAILHSTPILLRHHADADGITSAIAIERAILPLITEIGGSDAEYYFYKRAPSKAPFYELADVTRDI
SFALEDYARHGQKMPLVIQVDNGSTEEDVPAMRQANVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCA
EVARMINPNISDTIKHLPAVSAVGDRSEAPEAERYISLVSDRYTLEELKEMALALDYEQFWLKFSSGKGLIDDILDLGDH
TIHKNLVSLLCEQANAMIKEQLETCLFNVKSQKLSNGAIMNVIDVENYAQKFTFPPPGKTSGEVHDVLTKKYPDKPVVTI
GYGPDFAVIRSKGVLMNIPKIVRELREDIKGAGVNGGGHLVVGSIKFVEGMRTEVLSRLAEKIASAEVVY
>Mature_709_residues
SKECPDCHGRGYEVISTEVCPLCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKGSIEITRPCEACEGLGKIYTCK
VCGARIHNPEDAEDEICSTCARSQHVYALDESCDLKDVEAGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEVG
DAVIVLVKSIKAGGKLDLIPKTLAKYETIELEKELPLKDSSQIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFIP
CAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKVIDEKAAPADIPFLIESEILEK
LRPRMLHVAKEIKKAILHSTPILLRHHADADGITSAIAIERAILPLITEIGGSDAEYYFYKRAPSKAPFYELADVTRDIS
FALEDYARHGQKMPLVIQVDNGSTEEDVPAMRQANVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCAE
VARMINPNISDTIKHLPAVSAVGDRSEAPEAERYISLVSDRYTLEELKEMALALDYEQFWLKFSSGKGLIDDILDLGDHT
IHKNLVSLLCEQANAMIKEQLETCLFNVKSQKLSNGAIMNVIDVENYAQKFTFPPPGKTSGEVHDVLTKKYPDKPVVTIG
YGPDFAVIRSKGVLMNIPKIVRELREDIKGAGVNGGGHLVVGSIKFVEGMRTEVLSRLAEKIASAEVVY

Specific function: Unknown

COG id: COG1107

COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001305
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365
- InterPro:   IPR001667
- InterPro:   IPR003029
- InterPro:   IPR022967 [H]

Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 77802; Mature: 77671

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKECPDCHGRGYEVISTEVCPLCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKG
CCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHCCCC
SIEITRPCEACEGLGKIYTCKVCGARIHNPEDAEDEICSTCARSQHVYALDESCDLKDVE
CEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
AGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEVGDAVIVLVKSIKAGGKLDLI
CHHHHHHHHHHHHHCCEEEECCHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCEECC
PKTLAKYETIELEKELPLKDSSQIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFI
HHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCEE
PCAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKV
EEHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHH
IDEKAAPADIPFLIESEILEKLRPRMLHVAKEIKKAILHSTPILLRHHADADGITSAIAI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
ERAILPLITEIGGSDAEYYFYKRAPSKAPFYELADVTRDISFALEDYARHGQKMPLVIQV
HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
DNGSTEEDVPAMRQANVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCA
CCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHH
EVARMINPNISDTIKHLPAVSAVGDRSEAPEAERYISLVSDRYTLEELKEMALALDYEQF
HHHHHHCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
WLKFSSGKGLIDDILDLGDHTIHKNLVSLLCEQANAMIKEQLETCLFNVKSQKLSNGAIM
EEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
NVIDVENYAQKFTFPPPGKTSGEVHDVLTKKYPDKPVVTIGYGPDFAVIRSKGVLMNIPK
EEEEHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEECCHH
IVRELREDIKGAGVNGGGHLVVGSIKFVEGMRTEVLSRLAEKIASAEVVY
HHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKECPDCHGRGYEVISTEVCPLCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKG
CCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHCCCC
SIEITRPCEACEGLGKIYTCKVCGARIHNPEDAEDEICSTCARSQHVYALDESCDLKDVE
CEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
AGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEVGDAVIVLVKSIKAGGKLDLI
CHHHHHHHHHHHHHCCEEEECCHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCEECC
PKTLAKYETIELEKELPLKDSSQIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFI
HHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCEE
PCAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKV
EEHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHH
IDEKAAPADIPFLIESEILEKLRPRMLHVAKEIKKAILHSTPILLRHHADADGITSAIAI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
ERAILPLITEIGGSDAEYYFYKRAPSKAPFYELADVTRDISFALEDYARHGQKMPLVIQV
HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
DNGSTEEDVPAMRQANVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCA
CCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHH
EVARMINPNISDTIKHLPAVSAVGDRSEAPEAERYISLVSDRYTLEELKEMALALDYEQF
HHHHHHCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
WLKFSSGKGLIDDILDLGDHTIHKNLVSLLCEQANAMIKEQLETCLFNVKSQKLSNGAIM
EEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
NVIDVENYAQKFTFPPPGKTSGEVHDVLTKKYPDKPVVTIGYGPDFAVIRSKGVLMNIPK
EEEEHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEECCHH
IVRELREDIKGAGVNGGGHLVVGSIKFVEGMRTEVLSRLAEKIASAEVVY
HHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]