| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hisH [H]
Identifier: 21228132
GI number: 21228132
Start: 2425954
End: 2426577
Strand: Direct
Name: hisH [H]
Synonym: MM_2030
Alternate gene names: 21228132
Gene position: 2425954-2426577 (Clockwise)
Preceding gene: 21228131
Following gene: 21228133
Centisome position: 59.22
GC content: 47.12
Gene sequence:
>624_bases TTGTTTGTTAGAGCTATGAAAAGAATCGTGATTATCGATTACGGGCTTGGAAATCTCAGAAGTGTTCAAAAAGGGCTTGA ACACGCCGGAGCAAGTCCCGCAATCTCCGGGAATCCTGAAGAGATCCTGGCAGCAGACGGTATTATTCTCCCAGGAGTCG GTGCTTTTATAGATGCAATGAAGTGTCTGGTCCCTCTCAAAAAGACCATAGCCGAATTTGCAGAATCGGGAAAGCCAATG CTTGGAATATGCCTGGGGCAGCAGGTTTTGATGAGCTCTTCCGAAGAAGGCAGGCTGACAGACGGGCTTGACCTCATTCA GGGCAGGGTGCTTCGATTCCCGAAGTCTGAACTGAAAGTTCCTCAAATGGGCTGGAATAACATAAGGGTCAAACAGGACC ACCCTCTGTTTAAAGGCATTCCCGACGGTTCTTTCGTGTATTTCGTGCACTCATATTATGTGGATACTGCTGCAGAGAAC ACCCTTGCATCATGCGAATATGGGCTTGAATATGCGGCTTCAGTTGTAAACTCAAAAGGAAATGTTATGGGCACCCAGTT CCACCCTGAAAAAAGCGGAGCCACCGGGTTAAAGATTTTGAGAAACTTCGTTGAAATGTGCTGA
Upstream 100 bases:
>100_bases ATATTTTTCAGGTATATTTTCTATTTTTCTTTGATTCTTATTTCCTGATTTTTCTTGCCTTTCTGAAATTCTTTGTTCGT AAGCTTAATCTATCTTAACT
Downstream 100 bases:
>100_bases ATATTTTAAACTATAAATCTACTGGCTTGCTTTGTCTTTGCGGTTGAACATTTATTTATCATTTTTTAAACTTTTATGTC TGTGTTTTGGGCATTTTGTA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MFVRAMKRIVIIDYGLGNLRSVQKGLEHAGASPAISGNPEEILAADGIILPGVGAFIDAMKCLVPLKKTIAEFAESGKPM LGICLGQQVLMSSSEEGRLTDGLDLIQGRVLRFPKSELKVPQMGWNNIRVKQDHPLFKGIPDGSFVYFVHSYYVDTAAEN TLASCEYGLEYAASVVNSKGNVMGTQFHPEKSGATGLKILRNFVEMC
Sequences:
>Translated_207_residues MFVRAMKRIVIIDYGLGNLRSVQKGLEHAGASPAISGNPEEILAADGIILPGVGAFIDAMKCLVPLKKTIAEFAESGKPM LGICLGQQVLMSSSEEGRLTDGLDLIQGRVLRFPKSELKVPQMGWNNIRVKQDHPLFKGIPDGSFVYFVHSYYVDTAAEN TLASCEYGLEYAASVVNSKGNVMGTQFHPEKSGATGLKILRNFVEMC >Mature_207_residues MFVRAMKRIVIIDYGLGNLRSVQKGLEHAGASPAISGNPEEILAADGIILPGVGAFIDAMKCLVPLKKTIAEFAESGKPM LGICLGQQVLMSSSEEGRLTDGLDLIQGRVLRFPKSELKVPQMGWNNIRVKQDHPLFKGIPDGSFVYFVHSYYVDTAAEN TLASCEYGLEYAASVVNSKGNVMGTQFHPEKSGATGLKILRNFVEMC
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=198, Percent_Identity=41.4141414141414, Blast_Score=147, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6319725, Length=214, Percent_Identity=35.981308411215, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22466; Mature: 22466
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVRAMKRIVIIDYGLGNLRSVQKGLEHAGASPAISGNPEEILAADGIILPGVGAFIDAM CHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHH KCLVPLKKTIAEFAESGKPMLGICLGQQVLMSSSEEGRLTDGLDLIQGRVLRFPKSELKV HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCC PQMGWNNIRVKQDHPLFKGIPDGSFVYFVHSYYVDTAAENTLASCEYGLEYAASVVNSKG CCCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NVMGTQFHPEKSGATGLKILRNFVEMC CEEECCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MFVRAMKRIVIIDYGLGNLRSVQKGLEHAGASPAISGNPEEILAADGIILPGVGAFIDAM CHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHH KCLVPLKKTIAEFAESGKPMLGICLGQQVLMSSSEEGRLTDGLDLIQGRVLRFPKSELKV HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCC PQMGWNNIRVKQDHPLFKGIPDGSFVYFVHSYYVDTAAENTLASCEYGLEYAASVVNSKG CCCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NVMGTQFHPEKSGATGLKILRNFVEMC CEEECCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]