Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228088

Identifier: 21228088

GI number: 21228088

Start: 2365683

End: 2366636

Strand: Direct

Name: 21228088

Synonym: MM_1986

Alternate gene names: NA

Gene position: 2365683-2366636 (Clockwise)

Preceding gene: 21228087

Following gene: 21228104

Centisome position: 57.75

GC content: 46.33

Gene sequence:

>954_bases
GTGTCTCTCCCCATAAAATGGGTCCGGGATATAGGGCTTGAAGCCGGAGATACCCTTACTCTCACTCCCATGCCTAACAA
AACACTGCTTGTTTCCTCAAGTGCAATTTCTAAAGATCATTCCGTCCTTAAGGCAACTATAGACTATCTTCATTCCGATA
GTGCAGAAAACAACTTAAGGATCCTTATTTCACATTACCTTGTAGGTTACGATGTAATCAGGCTGACCACAAAAAAAGGT
TTCAGTGCCTATGACCGCAAGTTTATAAAGGACTCCGTGCGCCAGAAACTCATAGGTCTCGAGCTTGTGGAAGAGTCCAG
GAACGAACTTGTTTTCCAGTGCCTCCTGAACTACAATGACCTGCCTCTTAACCGTGTAATCAAAAACATGTACGGTCTCG
TCCTTTCAATGCTTGAGGATTCCATGACCGCCCTTCGGGACCATAATGTGGAAATTGCCGAAGACGTAATCCAGAGAGAC
GACGATGTGGACCGCTTCTACTTATTAGCCGTCCGCCAGCTCAAAGCCTCGATTGAGGACATAGAGCTCTCGGAAAAGAT
AGGAATCAGGCACCCGCGAGAATGTCTCGGGTACAGGCTTATTACCAAGAGCATTGAGCGTGTGGGAGACCATGCTGTAA
GGATCGCCAGAAATGTCCTTAAAATGGATTCCGGGATCAGCAGTGATGACCCTATTTTCAAGATGGCTGACCTCTCAAGG
AAAGTGTTTGAGAGTTCCATAGATTCCATGCAGGAGGAGGACCTTCAGGCTATAAACAAAATAGTTGTTGAAGCCAAAAA
AGTTTCCCAGTTTGGCGTTTCCCTCGAGTCCAGAGGCGACGAAGGTGAAGGCAGCATTGAGCTCAGCATGGTTCTTGAAA
GCCTGCGCAGGGTAGCCGAATACAGTGCCGATATCGCAGAAGTAGCAATTAATATGAATATAAAACAGATCTGA

Upstream 100 bases:

>100_bases
TCTATATAGATTTTGTAATATTCATTACTCTCTTCAAGGGGGCCTATTTATTACCAAGGATAAAAGAAAAGTCCAGTTTA
CAGGAAATTCTACTTATATT

Downstream 100 bases:

>100_bases
GTAATCAGATCTAAAAACAGATCCGAACCAAAAGGTTCTGCTCTGTCCTTTTTTTGCTCTGTCTTTTTTATTTCTTTTTC
TACCTTATATTTTCTTACTC

Product: putative regulatory protein

Products: NA

Alternate protein names: Transcription Regulator; Phosphate Uptake Regulator; Phosphate Regulatory Protein; SpoVT/AbrB Domain-Containing Protein; ABC Transport System Regulatory Protein; Transport System Regulatory Protein; ABC Transporter; Regulatory Protein; Phosphate Regulatory Protein-Like; Phosphate Transport System Protein

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSLPIKWVRDIGLEAGDTLTLTPMPNKTLLVSSSAISKDHSVLKATIDYLHSDSAENNLRILISHYLVGYDVIRLTTKKG
FSAYDRKFIKDSVRQKLIGLELVEESRNELVFQCLLNYNDLPLNRVIKNMYGLVLSMLEDSMTALRDHNVEIAEDVIQRD
DDVDRFYLLAVRQLKASIEDIELSEKIGIRHPRECLGYRLITKSIERVGDHAVRIARNVLKMDSGISSDDPIFKMADLSR
KVFESSIDSMQEEDLQAINKIVVEAKKVSQFGVSLESRGDEGEGSIELSMVLESLRRVAEYSADIAEVAINMNIKQI

Sequences:

>Translated_317_residues
MSLPIKWVRDIGLEAGDTLTLTPMPNKTLLVSSSAISKDHSVLKATIDYLHSDSAENNLRILISHYLVGYDVIRLTTKKG
FSAYDRKFIKDSVRQKLIGLELVEESRNELVFQCLLNYNDLPLNRVIKNMYGLVLSMLEDSMTALRDHNVEIAEDVIQRD
DDVDRFYLLAVRQLKASIEDIELSEKIGIRHPRECLGYRLITKSIERVGDHAVRIARNVLKMDSGISSDDPIFKMADLSR
KVFESSIDSMQEEDLQAINKIVVEAKKVSQFGVSLESRGDEGEGSIELSMVLESLRRVAEYSADIAEVAINMNIKQI
>Mature_316_residues
SLPIKWVRDIGLEAGDTLTLTPMPNKTLLVSSSAISKDHSVLKATIDYLHSDSAENNLRILISHYLVGYDVIRLTTKKGF
SAYDRKFIKDSVRQKLIGLELVEESRNELVFQCLLNYNDLPLNRVIKNMYGLVLSMLEDSMTALRDHNVEIAEDVIQRDD
DVDRFYLLAVRQLKASIEDIELSEKIGIRHPRECLGYRLITKSIERVGDHAVRIARNVLKMDSGISSDDPIFKMADLSRK
VFESSIDSMQEEDLQAINKIVVEAKKVSQFGVSLESRGDEGEGSIELSMVLESLRRVAEYSADIAEVAINMNIKQI

Specific function: Unknown

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35834; Mature: 35702

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIKWVRDIGLEAGDTLTLTPMPNKTLLVSSSAISKDHSVLKATIDYLHSDSAENNLR
CCCCHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHH
ILISHYLVGYDVIRLTTKKGFSAYDRKFIKDSVRQKLIGLELVEESRNELVFQCLLNYND
HHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPLNRVIKNMYGLVLSMLEDSMTALRDHNVEIAEDVIQRDDDVDRFYLLAVRQLKASIED
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IELSEKIGIRHPRECLGYRLITKSIERVGDHAVRIARNVLKMDSGISSDDPIFKMADLSR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KVFESSIDSMQEEDLQAINKIVVEAKKVSQFGVSLESRGDEGEGSIELSMVLESLRRVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
YSADIAEVAINMNIKQI
HCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLPIKWVRDIGLEAGDTLTLTPMPNKTLLVSSSAISKDHSVLKATIDYLHSDSAENNLR
CCCHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHH
ILISHYLVGYDVIRLTTKKGFSAYDRKFIKDSVRQKLIGLELVEESRNELVFQCLLNYND
HHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPLNRVIKNMYGLVLSMLEDSMTALRDHNVEIAEDVIQRDDDVDRFYLLAVRQLKASIED
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IELSEKIGIRHPRECLGYRLITKSIERVGDHAVRIARNVLKMDSGISSDDPIFKMADLSR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KVFESSIDSMQEEDLQAINKIVVEAKKVSQFGVSLESRGDEGEGSIELSMVLESLRRVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
YSADIAEVAINMNIKQI
HCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA