| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fwdB [H]
Identifier: 21228082
GI number: 21228082
Start: 2353366
End: 2354670
Strand: Reverse
Name: fwdB [H]
Synonym: MM_1980
Alternate gene names: 21228082
Gene position: 2354670-2353366 (Counterclockwise)
Preceding gene: 21228083
Following gene: 21228081
Centisome position: 57.48
GC content: 48.89
Gene sequence:
>1305_bases ATGCCAGTAATTAAAGACGCAGTATGCTCCCTCTGCGGATCCCTCTGCGACGATATCACAGTCACTGTAGAAGATAATAA GATTACAAAAATAGAAAATGCCTGCATTCTTGGGCACAGCAAGTTTGTCGGCATGTTCGAGCATGACAGGATAGAAACCC CGATGGTAAGAAAAGACGGGGAGCTTGTGCCTGTATCTTATGAAGAGGCAATCGAAGCTGCCGCAAAAATCCTGGTAAAC TCCAGAAGGACACTTTCCTATGGATGGTGCTCCACCTCATGTGAAGCAGTCAGCGGGGCAATTCAGCTCGCAGAGGAGAC TGGTTCTATAATAGACTCTACGGCAAACGTCTGCCACGGACCGACTGCCCTTGCTGCTCAGGAGAAAGGGTCCCCATCAG CCTCCCTGGGAGAAATAAAGAATAGGGCAGATGTAATAGTTTTCTGGGGCTGCAACCCTGTGCACGCCCATCCCAGGCAC ATGTCCCGTTATTCAAGCTTTTCAAAGGGATTCTTCACGGAAAAAGGGCGAAAAGGCAGGAAAATGGTAGTTATTGATGT CAGAAAGACCGATACTGCAAAAATTGCTGACAAATATGTGGAGATTGAACAGGGTTCAGACCTGCTCCTTGTGACCGCTC TCCGTTCAATTGTAAACGGGCATGAGGATGTTGTCCCGGAAACAGTTGCAGGTGTTCCAAAAGCCGAAGTTCTTGAACTT GCAGAGACCCTGAAGAATGCAAAATTCACCTGTATTTTCTTCGGTATGGGAGTCACACAGTCCCGCTCAAAGTACAAGAA CGGAGATGCAGTGTCTTCTCTGATATCAGACCTTAACCAGCACACCAAAGCTGTAATGATCGGAATGCGCGGGCACTATA ATGTTACCGGTTTCGGACAGGTGGCTACCTGGGAGACCGGCTTCCCCATGGCGATTGACTTCTCCAGAGGCTATCCATAT TACAACCCCGGAGAAACCGGAGCAAATGACCTGCTTGTGCGCGAAGAGCCTGATGCTGCAATTATAGCTGCAGCTGATGC CGGAGCACACTTCCCTCAAAAAGCTGTCAGGCACCTGGCAAGAATTCCCGTAATCCAGATTGACCCCTATGCCAACCCTA CAACCGAAATCGCAGATGTGGTGATCCCGGCAGCAGTTGTGGGAATCGAAGCTGAAGGTACGGCTTACCGCATGGATGCA ATCTCCCTCCGCATGAAGAAACTGATTGATACAGAGTTCAAGACCGACGAAGAGATCGTAAAAGACCTGACTGCAAAAGT AAGGGAAATGAAGAGAGGTGTATAA
Upstream 100 bases:
>100_bases CATGAGGAAATACCTGGAAGACTGAGTCCAGACCCCCTGAATCGAGTAACTCATGTGTTCATCAGGCCCGGAGAAACCTG AAAATTCGGAGGAAAAAAAT
Downstream 100 bases:
>100_bases GATGTCGGAAATCCTGATTAAAAACGCCAGCGTCTGTGACCCGGCACAGGGAATTAACTGCGAGACCATGGACATCTGCA TAAGAGACGGAAAGATTGTG
Product: tungsten formylmethanofuran dehydrogenase subunit B
Products: NA
Alternate protein names: Tungsten-containing formylmethanofuran dehydrogenase II subunit B [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPVIKDAVCSLCGSLCDDITVTVEDNKITKIENACILGHSKFVGMFEHDRIETPMVRKDGELVPVSYEEAIEAAAKILVN SRRTLSYGWCSTSCEAVSGAIQLAEETGSIIDSTANVCHGPTALAAQEKGSPSASLGEIKNRADVIVFWGCNPVHAHPRH MSRYSSFSKGFFTEKGRKGRKMVVIDVRKTDTAKIADKYVEIEQGSDLLLVTALRSIVNGHEDVVPETVAGVPKAEVLEL AETLKNAKFTCIFFGMGVTQSRSKYKNGDAVSSLISDLNQHTKAVMIGMRGHYNVTGFGQVATWETGFPMAIDFSRGYPY YNPGETGANDLLVREEPDAAIIAAADAGAHFPQKAVRHLARIPVIQIDPYANPTTEIADVVIPAAVVGIEAEGTAYRMDA ISLRMKKLIDTEFKTDEEIVKDLTAKVREMKRGV
Sequences:
>Translated_434_residues MPVIKDAVCSLCGSLCDDITVTVEDNKITKIENACILGHSKFVGMFEHDRIETPMVRKDGELVPVSYEEAIEAAAKILVN SRRTLSYGWCSTSCEAVSGAIQLAEETGSIIDSTANVCHGPTALAAQEKGSPSASLGEIKNRADVIVFWGCNPVHAHPRH MSRYSSFSKGFFTEKGRKGRKMVVIDVRKTDTAKIADKYVEIEQGSDLLLVTALRSIVNGHEDVVPETVAGVPKAEVLEL AETLKNAKFTCIFFGMGVTQSRSKYKNGDAVSSLISDLNQHTKAVMIGMRGHYNVTGFGQVATWETGFPMAIDFSRGYPY YNPGETGANDLLVREEPDAAIIAAADAGAHFPQKAVRHLARIPVIQIDPYANPTTEIADVVIPAAVVGIEAEGTAYRMDA ISLRMKKLIDTEFKTDEEIVKDLTAKVREMKRGV >Mature_433_residues PVIKDAVCSLCGSLCDDITVTVEDNKITKIENACILGHSKFVGMFEHDRIETPMVRKDGELVPVSYEEAIEAAAKILVNS RRTLSYGWCSTSCEAVSGAIQLAEETGSIIDSTANVCHGPTALAAQEKGSPSASLGEIKNRADVIVFWGCNPVHAHPRHM SRYSSFSKGFFTEKGRKGRKMVVIDVRKTDTAKIADKYVEIEQGSDLLLVTALRSIVNGHEDVVPETVAGVPKAEVLELA ETLKNAKFTCIFFGMGVTQSRSKYKNGDAVSSLISDLNQHTKAVMIGMRGHYNVTGFGQVATWETGFPMAIDFSRGYPYY NPGETGANDLLVREEPDAAIIAAADAGAHFPQKAVRHLARIPVIQIDPYANPTTEIADVVIPAAVVGIEAEGTAYRMDAI SLRMKKLIDTEFKTDEEIVKDLTAKVREMKRGV
Specific function: Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). This enzyme is oxygen-labile [H]
COG id: COG1029
COG function: function code C; Formylmethanofuran dehydrogenase subunit B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fwdB family [H]
Homologues:
Organism=Escherichia coli, GI3868721, Length=506, Percent_Identity=26.2845849802372, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016457 - InterPro: IPR006656 [H]
Pfam domain/function: PF00384 Molybdopterin [H]
EC number: =1.2.99.5 [H]
Molecular weight: Translated: 47200; Mature: 47069
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIKDAVCSLCGSLCDDITVTVEDNKITKIENACILGHSKFVGMFEHDRIETPMVRKDG CCCHHHHHHHHHHHHHCCEEEEEECCCEEEECCEEEECCHHHCCCHHCCCCCCCCCCCCC ELVPVSYEEAIEAAAKILVNSRRTLSYGWCSTSCEAVSGAIQLAEETGSIIDSTANVCHG CEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PTALAAQEKGSPSASLGEIKNRADVIVFWGCNPVHAHPRHMSRYSSFSKGFFTEKGRKGR CCHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC KMVVIDVRKTDTAKIADKYVEIEQGSDLLLVTALRSIVNGHEDVVPETVAGVPKAEVLEL EEEEEEECCCCHHHHHHHHEEECCCCCEEHHHHHHHHHCCCHHCCCHHHHCCCHHHHHHH AETLKNAKFTCIFFGMGVTQSRSKYKNGDAVSSLISDLNQHTKAVMIGMRGHYNVTGFGQ HHHHHCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC VATWETGFPMAIDFSRGYPYYNPGETGANDLLVREEPDAAIIAAADAGAHFPQKAVRHLA EEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHH RIPVIQIDPYANPTTEIADVVIPAAVVGIEAEGTAYRMDAISLRMKKLIDTEFKTDEEIV HCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHH KDLTAKVREMKRGV HHHHHHHHHHHCCC >Mature Secondary Structure PVIKDAVCSLCGSLCDDITVTVEDNKITKIENACILGHSKFVGMFEHDRIETPMVRKDG CCHHHHHHHHHHHHHCCEEEEEECCCEEEECCEEEECCHHHCCCHHCCCCCCCCCCCCC ELVPVSYEEAIEAAAKILVNSRRTLSYGWCSTSCEAVSGAIQLAEETGSIIDSTANVCHG CEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PTALAAQEKGSPSASLGEIKNRADVIVFWGCNPVHAHPRHMSRYSSFSKGFFTEKGRKGR CCHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC KMVVIDVRKTDTAKIADKYVEIEQGSDLLLVTALRSIVNGHEDVVPETVAGVPKAEVLEL EEEEEEECCCCHHHHHHHHEEECCCCCEEHHHHHHHHHCCCHHCCCHHHHCCCHHHHHHH AETLKNAKFTCIFFGMGVTQSRSKYKNGDAVSSLISDLNQHTKAVMIGMRGHYNVTGFGQ HHHHHCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC VATWETGFPMAIDFSRGYPYYNPGETGANDLLVREEPDAAIIAAADAGAHFPQKAVRHLA EEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHH RIPVIQIDPYANPTTEIADVVIPAAVVGIEAEGTAYRMDAISLRMKKLIDTEFKTDEEIV HCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHH KDLTAKVREMKRGV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]