| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fwdA [H]
Identifier: 21228081
GI number: 21228081
Start: 2351646
End: 2353364
Strand: Reverse
Name: fwdA [H]
Synonym: MM_1979
Alternate gene names: 21228081
Gene position: 2353364-2351646 (Counterclockwise)
Preceding gene: 21228082
Following gene: 21228080
Centisome position: 57.45
GC content: 49.85
Gene sequence:
>1719_bases ATGTCGGAAATCCTGATTAAAAACGCCAGCGTCTGTGACCCGGCACAGGGAATTAACTGCGAGACCATGGACATCTGCAT AAGAGACGGAAAGATTGTGGAGAGCGTCTCCGGAAGTGCAGAGGTTATTGATGCAGAGGGCAGGCTCACCATGGCAGGAG GCTTTGACGGGCACACACACAGCGCGGGAAAGATCAACGTAGGACGTTTCATCAACCCAAACGATGCAAGGAAAAACCCT GTACCCGGGCTTTCTGGCCAGGTCGCACGTACCGAAAAGACAAGAGCTCAGGTAGGGTATAATACCCCAAACACTTACGC AATCGGATACAGGTATGCAAAACTGGGGTATACAACCATCTGTGAAGCTGCAATCCCCCTGCTTGCTGCAAGGCATACCC ATGAAGAATTCAAGGAAATCCCTATCCTTGACAAAATGGGGCTGTCACTCTTCGGGAGCAACTGGCAGGTCATGGAGTAC ATCCGTGACAAGGAGCCTGAAAAACTTGCAGCATACATTGCCTGGGGATTGAAAGCCTCAAGAGGATATGGAGTAAAGAT TGTAAACCCCGGAGGAGGAGAAGCCTGGGGCTGGGGAAGAAACGTAAGCGGACTTTATGACCCTGTACCCAACTTTGATG TAACTCCTGCAGAGATCCTTCTGGGGCTTGCAGAAGCTAATGAGCGCCTTCAGCTCCCTCACTCCATACACGTGCACTGC AACAACCTCGGAAAGCCAGGAAACTATGCTACAACCATAGAGACCATGAAGCTTCTGGAAAAGGTTAAGCCCAGCAGGGA CAGGCAGGCTCTTCACGTAACCCACGTTCAGTTCAATGCTTATGCAGGGACTTCCTGGAGGGACTTTGAGACAGGAGCCC CAATGGTTGCAGATTACATTAACGGAGCAAACCACCTGACCTTCGACCTGGGACAGGTAATCTTCGGACCCGCAGTTACA ATGACCGCAGACGGGCCTGTTGAGTATGCAAACTCAAGAATGCTGCACGAGAAGTGGAGCAACCAGGACATTGAACTGGA AGATGCTTCCGGAGTCGTACCCCTGTTCTACTCACCAAAAAGCTTTGTGAACGCGGTCCAGTGGGCAATAGGGCTTGAAC TCGCCCTGCTTGTAAAAGACCCCTGGAAAGTCATGTTTACAACTGACAGCCCCAACGGCGGGTCTTTTGTCAACTATCCT GAAGCCTTTACCTACCTTATGAGTGCAAAGAGAAGAGAAGAAGTTATCTCGGGATTCTCTAAGATGGCACTCGACAGGAT GGTACTGCCCGGAATCGACAGGGAACTTGACTTTTATGAGCTTGCTGTCATGACAAGGAGCACACAGTCAAAGATGTACA GCATGCCTGAGAAAGGAAACCTTAAAGTGGGCTCTGACGCTGACATTGCTATCTATGACATCCTTCCGGGGCAGGTTGAC CCCTCGACAGAGTATGCAAAGGTCAAGAAAGCTTTCTCTGCTGCATCATATACCCTGAAGAGCGGAGAGGTCGTTGTAAA AGACGGAGAGATCGAAGAGACCCCGAAAGGAAAGACTTACTGGGTTAACGCAAAGATTCCGGAGAGCATCGATACCGCAA TGCAGAAAGATATAGACCGCAAATTCAGGAAGTATTACACTGTGAGCAAATCCAATTACATGGTTGAAGACTCGTATATC CAGAAGCCTGTCGAGATCGGCACAGAGGGGGTTTTCTAA
Upstream 100 bases:
>100_bases CTCCGCATGAAGAAACTGATTGATACAGAGTTCAAGACCGACGAAGAGATCGTAAAAGACCTGACTGCAAAAGTAAGGGA AATGAAGAGAGGTGTATAAG
Downstream 100 bases:
>100_bases ATGCAGATTGTAAAACTCTCCCTCAAAAAAGCAAACAAAATTCCAATTGAAGCCGATAACATAAACCCTGACAACTTTGC CGGCAAAACTGCAGAAGAAA
Product: tungsten formylmethanofuran dehydrogenase subunit A
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MSEILIKNASVCDPAQGINCETMDICIRDGKIVESVSGSAEVIDAEGRLTMAGGFDGHTHSAGKINVGRFINPNDARKNP VPGLSGQVARTEKTRAQVGYNTPNTYAIGYRYAKLGYTTICEAAIPLLAARHTHEEFKEIPILDKMGLSLFGSNWQVMEY IRDKEPEKLAAYIAWGLKASRGYGVKIVNPGGGEAWGWGRNVSGLYDPVPNFDVTPAEILLGLAEANERLQLPHSIHVHC NNLGKPGNYATTIETMKLLEKVKPSRDRQALHVTHVQFNAYAGTSWRDFETGAPMVADYINGANHLTFDLGQVIFGPAVT MTADGPVEYANSRMLHEKWSNQDIELEDASGVVPLFYSPKSFVNAVQWAIGLELALLVKDPWKVMFTTDSPNGGSFVNYP EAFTYLMSAKRREEVISGFSKMALDRMVLPGIDRELDFYELAVMTRSTQSKMYSMPEKGNLKVGSDADIAIYDILPGQVD PSTEYAKVKKAFSAASYTLKSGEVVVKDGEIEETPKGKTYWVNAKIPESIDTAMQKDIDRKFRKYYTVSKSNYMVEDSYI QKPVEIGTEGVF
Sequences:
>Translated_572_residues MSEILIKNASVCDPAQGINCETMDICIRDGKIVESVSGSAEVIDAEGRLTMAGGFDGHTHSAGKINVGRFINPNDARKNP VPGLSGQVARTEKTRAQVGYNTPNTYAIGYRYAKLGYTTICEAAIPLLAARHTHEEFKEIPILDKMGLSLFGSNWQVMEY IRDKEPEKLAAYIAWGLKASRGYGVKIVNPGGGEAWGWGRNVSGLYDPVPNFDVTPAEILLGLAEANERLQLPHSIHVHC NNLGKPGNYATTIETMKLLEKVKPSRDRQALHVTHVQFNAYAGTSWRDFETGAPMVADYINGANHLTFDLGQVIFGPAVT MTADGPVEYANSRMLHEKWSNQDIELEDASGVVPLFYSPKSFVNAVQWAIGLELALLVKDPWKVMFTTDSPNGGSFVNYP EAFTYLMSAKRREEVISGFSKMALDRMVLPGIDRELDFYELAVMTRSTQSKMYSMPEKGNLKVGSDADIAIYDILPGQVD PSTEYAKVKKAFSAASYTLKSGEVVVKDGEIEETPKGKTYWVNAKIPESIDTAMQKDIDRKFRKYYTVSKSNYMVEDSYI QKPVEIGTEGVF >Mature_571_residues SEILIKNASVCDPAQGINCETMDICIRDGKIVESVSGSAEVIDAEGRLTMAGGFDGHTHSAGKINVGRFINPNDARKNPV PGLSGQVARTEKTRAQVGYNTPNTYAIGYRYAKLGYTTICEAAIPLLAARHTHEEFKEIPILDKMGLSLFGSNWQVMEYI RDKEPEKLAAYIAWGLKASRGYGVKIVNPGGGEAWGWGRNVSGLYDPVPNFDVTPAEILLGLAEANERLQLPHSIHVHCN NLGKPGNYATTIETMKLLEKVKPSRDRQALHVTHVQFNAYAGTSWRDFETGAPMVADYINGANHLTFDLGQVIFGPAVTM TADGPVEYANSRMLHEKWSNQDIELEDASGVVPLFYSPKSFVNAVQWAIGLELALLVKDPWKVMFTTDSPNGGSFVNYPE AFTYLMSAKRREEVISGFSKMALDRMVLPGIDRELDFYELAVMTRSTQSKMYSMPEKGNLKVGSDADIAIYDILPGQVDP STEYAKVKKAFSAASYTLKSGEVVVKDGEIEETPKGKTYWVNAKIPESIDTAMQKDIDRKFRKYYTVSKSNYMVEDSYIQ KPVEIGTEGVF
Specific function: Unknown
COG id: COG1229
COG function: function code C; Formylmethanofuran dehydrogenase subunit A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR012027 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: 1.2.99.5
Molecular weight: Translated: 63217; Mature: 63086
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILIKNASVCDPAQGINCETMDICIRDGKIVESVSGSAEVIDAEGRLTMAGGFDGHTH CCCEEECCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCEEEECCCCEEEECCCCCCCC SAGKINVGRFINPNDARKNPVPGLSGQVARTEKTRAQVGYNTPNTYAIGYRYAKLGYTTI CCCEEEECCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCHHHH CEAAIPLLAARHTHEEFKEIPILDKMGLSLFGSNWQVMEYIRDKEPEKLAAYIAWGLKAS HHHHHHHHHHHHCHHHHHHCCCHHHCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC RGYGVKIVNPGGGEAWGWGRNVSGLYDPVPNFDVTPAEILLGLAEANERLQLPHSIHVHC CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEE NNLGKPGNYATTIETMKLLEKVKPSRDRQALHVTHVQFNAYAGTSWRDFETGAPMVADYI CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHH NGANHLTFDLGQVIFGPAVTMTADGPVEYANSRMLHEKWSNQDIELEDASGVVPLFYSPK CCCCEEEEEHHHHHCCCEEEEECCCCHHHHCCHHHHHHCCCCCEEEECCCCEEEEEECCH SFVNAVQWAIGLELALLVKDPWKVMFTTDSPNGGSFVNYPEAFTYLMSAKRREEVISGFS HHHHHHHHHHCCEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KMALDRMVLPGIDRELDFYELAVMTRSTQSKMYSMPEKGNLKVGSDADIAIYDILPGQVD HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCC PSTEYAKVKKAFSAASYTLKSGEVVVKDGEIEETPKGKTYWVNAKIPESIDTAMQKDIDR CCHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH KFRKYYTVSKSNYMVEDSYIQKPVEIGTEGVF HHHHHEEECCCCEEEEHHHHCCCHHCCCCCCC >Mature Secondary Structure SEILIKNASVCDPAQGINCETMDICIRDGKIVESVSGSAEVIDAEGRLTMAGGFDGHTH CCEEECCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCEEEECCCCEEEECCCCCCCC SAGKINVGRFINPNDARKNPVPGLSGQVARTEKTRAQVGYNTPNTYAIGYRYAKLGYTTI CCCEEEECCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCHHHH CEAAIPLLAARHTHEEFKEIPILDKMGLSLFGSNWQVMEYIRDKEPEKLAAYIAWGLKAS HHHHHHHHHHHHCHHHHHHCCCHHHCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC RGYGVKIVNPGGGEAWGWGRNVSGLYDPVPNFDVTPAEILLGLAEANERLQLPHSIHVHC CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEE NNLGKPGNYATTIETMKLLEKVKPSRDRQALHVTHVQFNAYAGTSWRDFETGAPMVADYI CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHH NGANHLTFDLGQVIFGPAVTMTADGPVEYANSRMLHEKWSNQDIELEDASGVVPLFYSPK CCCCEEEEEHHHHHCCCEEEEECCCCHHHHCCHHHHHHCCCCCEEEECCCCEEEEEECCH SFVNAVQWAIGLELALLVKDPWKVMFTTDSPNGGSFVNYPEAFTYLMSAKRREEVISGFS HHHHHHHHHHCCEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KMALDRMVLPGIDRELDFYELAVMTRSTQSKMYSMPEKGNLKVGSDADIAIYDILPGQVD HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCC PSTEYAKVKKAFSAASYTLKSGEVVVKDGEIEETPKGKTYWVNAKIPESIDTAMQKDIDR CCHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH KFRKYYTVSKSNYMVEDSYIQKPVEIGTEGVF HHHHHEEECCCCEEEEHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]