| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228070
Identifier: 21228070
GI number: 21228070
Start: 2338029
End: 2338769
Strand: Direct
Name: 21228070
Synonym: MM_1968
Alternate gene names: NA
Gene position: 2338029-2338769 (Clockwise)
Preceding gene: 21228069
Following gene: 21228071
Centisome position: 57.08
GC content: 45.61
Gene sequence:
>741_bases ATGGCAGTAACACTGAAGTTCGGGGATAAAGTCACTGTGGCAGATGTAAGAAAACTCCATGATATGGAAGATGTGGTATT TGATAGAGAATGGTTTGAAAAGACCGATGAAATGAACAGAGATATGTATTATATGTTCAGGGATCTTGCCAGAAGTGATT CTGATCTTGAGATTATCAAATCCCGCCACCTCAGGTATGACATTACAAGAATCCCTCCCGGAATGCTCGGGTCGGAGTAT ATTAAAACCGTTGGCCACTACCATCCTCAAGTTCCGGGAACAGACGTCTCCTATCCTGAGATTTACCAGGTGCTTGAAGG CTCAGCTACCTACCTGCTGCAAAAGGTGGAGCCCGGAGAAGAAGAAATTGTTCTGGACGTTGCGGTTATCAAGGCTGAAA AAGGGGATCTGGTTCTTGTTCCACCAGGATACGGGCACGTAACAATAAATTCCTCTGAAAATACTCTTGAGATGGCAAAC TGGGTTTGCGGGGACTTCTCTTCGTTCTATGAGCCTATAAAGAGGCTTTCCGGAGCCGCCTATTTCCTACTTAAAGACGG TTTTGCCAAAAACCCCCTTTATAGAAATATCCCGCCCATACGTTATACTGCACCTCTAAGCTCTGAAGAATTCGGGCTTG ATCCCGGAGAAAGCATGTATGAACTTATACACGATGCTGACAGGCTAAGGTTCCTGACAGCTCCTCAGGAGTTTATGGGA TTTCTGGCAGGAGTGCTCTGA
Upstream 100 bases:
>100_bases CTGATTCCTGTTAGTTTTCGTAACAGGATTGTATATGTAGTTGAACAGGCTCTCTATAGTATTGAAGGTTATTATATACT TTAAAACAAAGGGGAATTCA
Downstream 100 bases:
>100_bases AATAGGCTCCTGAATTTTATAATGGGTAAGGACTTTGTATCCGGTATTCATCCCAAAAGCTACTTTTAGAAGCTTCAGTT TTACCTTTTTATAATTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glucose-6-Phosphate Isomerase-Like Protein; Glucose-6-Phosphate Isomerase Bacteriophage Origin
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAVTLKFGDKVTVADVRKLHDMEDVVFDREWFEKTDEMNRDMYYMFRDLARSDSDLEIIKSRHLRYDITRIPPGMLGSEY IKTVGHYHPQVPGTDVSYPEIYQVLEGSATYLLQKVEPGEEEIVLDVAVIKAEKGDLVLVPPGYGHVTINSSENTLEMAN WVCGDFSSFYEPIKRLSGAAYFLLKDGFAKNPLYRNIPPIRYTAPLSSEEFGLDPGESMYELIHDADRLRFLTAPQEFMG FLAGVL
Sequences:
>Translated_246_residues MAVTLKFGDKVTVADVRKLHDMEDVVFDREWFEKTDEMNRDMYYMFRDLARSDSDLEIIKSRHLRYDITRIPPGMLGSEY IKTVGHYHPQVPGTDVSYPEIYQVLEGSATYLLQKVEPGEEEIVLDVAVIKAEKGDLVLVPPGYGHVTINSSENTLEMAN WVCGDFSSFYEPIKRLSGAAYFLLKDGFAKNPLYRNIPPIRYTAPLSSEEFGLDPGESMYELIHDADRLRFLTAPQEFMG FLAGVL >Mature_245_residues AVTLKFGDKVTVADVRKLHDMEDVVFDREWFEKTDEMNRDMYYMFRDLARSDSDLEIIKSRHLRYDITRIPPGMLGSEYI KTVGHYHPQVPGTDVSYPEIYQVLEGSATYLLQKVEPGEEEIVLDVAVIKAEKGDLVLVPPGYGHVTINSSENTLEMANW VCGDFSSFYEPIKRLSGAAYFLLKDGFAKNPLYRNIPPIRYTAPLSSEEFGLDPGESMYELIHDADRLRFLTAPQEFMGF LAGVL
Specific function: Unknown
COG id: COG2140
COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28035; Mature: 27904
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTLKFGDKVTVADVRKLHDMEDVVFDREWFEKTDEMNRDMYYMFRDLARSDSDLEIIK CEEEEECCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH SRHLRYDITRIPPGMLGSEYIKTVGHYHPQVPGTDVSYPEIYQVLEGSATYLLQKVEPGE HCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCC EEIVLDVAVIKAEKGDLVLVPPGYGHVTINSSENTLEMANWVCGDFSSFYEPIKRLSGAA CCEEEEEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCE YFLLKDGFAKNPLYRNIPPIRYTAPLSSEEFGLDPGESMYELIHDADRLRFLTAPQEFMG EEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHH FLAGVL HHHHCC >Mature Secondary Structure AVTLKFGDKVTVADVRKLHDMEDVVFDREWFEKTDEMNRDMYYMFRDLARSDSDLEIIK EEEEECCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH SRHLRYDITRIPPGMLGSEYIKTVGHYHPQVPGTDVSYPEIYQVLEGSATYLLQKVEPGE HCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCC EEIVLDVAVIKAEKGDLVLVPPGYGHVTINSSENTLEMANWVCGDFSSFYEPIKRLSGAA CCEEEEEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCE YFLLKDGFAKNPLYRNIPPIRYTAPLSSEEFGLDPGESMYELIHDADRLRFLTAPQEFMG EEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHH FLAGVL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA