| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228059
Identifier: 21228059
GI number: 21228059
Start: 2326868
End: 2327095
Strand: Reverse
Name: 21228059
Synonym: MM_1957
Alternate gene names: NA
Gene position: 2327095-2326868 (Counterclockwise)
Preceding gene: 21228060
Following gene: 21228058
Centisome position: 56.81
GC content: 46.05
Gene sequence:
>228_bases GTGGCAGAACTGGAAGTAGATGTTAGAGGGCAGACCTGCCCGGTACCTCTTGTAGAGTGCAGAAAAGCGTTTAAAAAAGC CTCTCCAGGAGACCTTGTAATTGTAAAGGGTACGCATCCGGCATCAAAAAAAGAAATTCCCATGGCATGTGAGGCTCTGG GGCTCACCGTGCTGGAGATTGAAGACAAAAAAGAAGGAAAAGAATGGGAAATAAAAATCCGGAGGTAA
Upstream 100 bases:
>100_bases TCCATACGAAACGATAATATATTTTTTGAAATATAGTGATCTGGGGGAAGACATTCATTTTTTAGGAGCCTTCCATTTCT CTTACTCCGGGGGGATAACA
Downstream 100 bases:
>100_bases GGCCGGGAAAGGAGTGGAGATGGGGGAAAAGGCGGTAATCGTCCTTCACAGCGGGGATATGGATAAGGTATACAGCGCAC TTATAATTGCAAACGGAGCC
Product: transcriptional regulator
Products: NA
Alternate protein names: SirA Family Protein
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MAELEVDVRGQTCPVPLVECRKAFKKASPGDLVIVKGTHPASKKEIPMACEALGLTVLEIEDKKEGKEWEIKIRR
Sequences:
>Translated_75_residues MAELEVDVRGQTCPVPLVECRKAFKKASPGDLVIVKGTHPASKKEIPMACEALGLTVLEIEDKKEGKEWEIKIRR >Mature_74_residues AELEVDVRGQTCPVPLVECRKAFKKASPGDLVIVKGTHPASKKEIPMACEALGLTVLEIEDKKEGKEWEIKIRR
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8345; Mature: 8214
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELEVDVRGQTCPVPLVECRKAFKKASPGDLVIVKGTHPASKKEIPMACEALGLTVLEI CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEHHHCEEEEEE EDKKEGKEWEIKIRR CCCCCCCEEEEEEEC >Mature Secondary Structure AELEVDVRGQTCPVPLVECRKAFKKASPGDLVIVKGTHPASKKEIPMACEALGLTVLEI CCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEHHHCEEEEEE EDKKEGKEWEIKIRR CCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA