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The map label for this gene is ycfF [C]

Identifier: 21228060

GI number: 21228060

Start: 2327241

End: 2327708

Strand: Reverse

Name: ycfF [C]

Synonym: MM_1958

Alternate gene names: 21228060

Gene position: 2327708-2327241 (Counterclockwise)

Preceding gene: 21228063

Following gene: 21228059

Centisome position: 56.82

GC content: 41.88

Gene sequence:

>468_bases
ATGGGGTACTCTATGACAGAAAATTGCCTCTTTTGCAAGATAATATCAGGTGAGATTCCTTCAAAGAAGGTATATGAAGA
TGATGCTGTATGTGCATTTCTTGACATCTACCCGGCAAGTGAAGGACACACTCTTATAGCTCCCAAAAAGCATTTTAATA
GTTTTACAGATATGGGCGCAGAAGATACAGCCAGACTTTTTGAAGCTGCAAGAAAAATTACAGCTGCGGTTGAAAAAGCA
TTTTCAGCGGAAGGGTCGAATATTGGTATAAACAACGGGGAAGTAGCAGGGCAGGAAGTCCCCCATGTGCATGTACATGT
CATTCCCAGAAAAAAGGGAGATGGAGGAAGAGGAATAAAGTCAATAGTATGGACCGAACCTGACAGGACCAATCTGAACG
AAGTTGCGGAAAAGATCAGGAAAAAACTGAGGGAAAACGAAAGTCTTCAGGTAGATGCACCTGTATAA

Upstream 100 bases:

>100_bases
GATTTAACTTTATAATACATTATGTAAAGTGAGCACCGGATAGTAGTTAAAGTTTATCGGAGAAACAGAAACCTGATATA
AGTGAGTATCATAAACCTTT

Downstream 100 bases:

>100_bases
AAAAGAGCAAAGATTCGGATTGAAAAACAGATCCGAATAATAATTTCCATACGAAACGATAATATATTTTTTGAAATATA
GTGATCTGGGGGAAGACATT

Product: Hit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MGYSMTENCLFCKIISGEIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGAEDTARLFEAARKITAAVEKA
FSAEGSNIGINNGEVAGQEVPHVHVHVIPRKKGDGGRGIKSIVWTEPDRTNLNEVAEKIRKKLRENESLQVDAPV

Sequences:

>Translated_155_residues
MGYSMTENCLFCKIISGEIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGAEDTARLFEAARKITAAVEKA
FSAEGSNIGINNGEVAGQEVPHVHVHVIPRKKGDGGRGIKSIVWTEPDRTNLNEVAEKIRKKLRENESLQVDAPV
>Mature_154_residues
GYSMTENCLFCKIISGEIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGAEDTARLFEAARKITAAVEKAF
SAEGSNIGINNGEVAGQEVPHVHVHVIPRKKGDGGRGIKSIVWTEPDRTNLNEVAEKIRKKLRENESLQVDAPV

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI261278358, Length=98, Percent_Identity=34.6938775510204, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4503719, Length=98, Percent_Identity=34.6938775510204, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1787346, Length=116, Percent_Identity=37.9310344827586, Blast_Score=66, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17556280, Length=99, Percent_Identity=37.3737373737374, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=31.858407079646, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=113, Percent_Identity=41.5929203539823, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 17013; Mature: 16882

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYSMTENCLFCKIISGEIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGA
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCHHHHHHHHCCCC
EDTARLFEAARKITAAVEKAFSAEGSNIGINNGEVAGQEVPHVHVHVIPRKKGDGGRGIK
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
SIVWTEPDRTNLNEVAEKIRKKLRENESLQVDAPV
EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
GYSMTENCLFCKIISGEIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGA
CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCHHHHHHHHCCCC
EDTARLFEAARKITAAVEKAFSAEGSNIGINNGEVAGQEVPHVHVHVIPRKKGDGGRGIK
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
SIVWTEPDRTNLNEVAEKIRKKLRENESLQVDAPV
EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]