Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228024

Identifier: 21228024

GI number: 21228024

Start: 2286069

End: 2286575

Strand: Reverse

Name: 21228024

Synonym: MM_1922

Alternate gene names: NA

Gene position: 2286575-2286069 (Counterclockwise)

Preceding gene: 21228027

Following gene: 21228023

Centisome position: 55.82

GC content: 39.84

Gene sequence:

>507_bases
TTGGAGGAAAAGCGGATGTCACTTGTAGACTTCCTGGGGGCCACATCTGAAATAAAAATTATAGATTTCCTGGCCGAAAA
TATGGACATGGCCTACAACCAGACAGAAATTAGTGAGTGCCTTGGGATTTCCCGTACCGTTGTAAATCAGAAAATCCCAG
TATTAATATACAACAATATTATAGAAGTAAAAGAGTGTAAGGGAAATACAAAAAAGTATGGACTAAAAGAAAACAGTCTG
GTAAACAAAATAATTGCCACAATCTATGACCACAGTTTCAGAATGGCAGAATATGAAGGAGACGAAGAAGAAGTGCTCTC
CGAAATTTCTGACAAACACCAAGCATCACCTGAAGAAAATTGTGATTGCTATTGCGGAGAACCACGCTATATTGAGTTTT
ACGAGACGCCAGGATACCAGCTTGACTGGTTCCAAGAAAGAATGGAAAAGGCAGAAAACTACAAACCAAAATGGGAAAAG
ATGCAGACGGTGTTTGCTTCGGCGTGA

Upstream 100 bases:

>100_bases
AATAACTTTCTGCACAGTTATTAATTGTTAATCAGGAGATAAATTATTAATTGAGACCTTTCTAGTAATACGAAAGGATC
ATATAAAATTTTAACTGTAA

Downstream 100 bases:

>100_bases
GAATTTTTTTGAGGGATAATTCATGGCAGCAGAACAGGATAAAGAGCAAGACAGCAAGCCAGAAGAGGCCGAAGAAAAGA
AAAAAGTCGCTGTATATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL
VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK
MQTVFASA

Sequences:

>Translated_168_residues
MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL
VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK
MQTVFASA
>Mature_168_residues
MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL
VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK
MQTVFASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19617; Mature: 19617

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNI
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCE
IEVKECKGNTKKYGLKENSLVNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEEN
EEEHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCC
CDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEKMQTVFASA
CCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNI
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCE
IEVKECKGNTKKYGLKENSLVNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEEN
EEEHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCC
CDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEKMQTVFASA
CCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA