| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228024
Identifier: 21228024
GI number: 21228024
Start: 2286069
End: 2286575
Strand: Reverse
Name: 21228024
Synonym: MM_1922
Alternate gene names: NA
Gene position: 2286575-2286069 (Counterclockwise)
Preceding gene: 21228027
Following gene: 21228023
Centisome position: 55.82
GC content: 39.84
Gene sequence:
>507_bases TTGGAGGAAAAGCGGATGTCACTTGTAGACTTCCTGGGGGCCACATCTGAAATAAAAATTATAGATTTCCTGGCCGAAAA TATGGACATGGCCTACAACCAGACAGAAATTAGTGAGTGCCTTGGGATTTCCCGTACCGTTGTAAATCAGAAAATCCCAG TATTAATATACAACAATATTATAGAAGTAAAAGAGTGTAAGGGAAATACAAAAAAGTATGGACTAAAAGAAAACAGTCTG GTAAACAAAATAATTGCCACAATCTATGACCACAGTTTCAGAATGGCAGAATATGAAGGAGACGAAGAAGAAGTGCTCTC CGAAATTTCTGACAAACACCAAGCATCACCTGAAGAAAATTGTGATTGCTATTGCGGAGAACCACGCTATATTGAGTTTT ACGAGACGCCAGGATACCAGCTTGACTGGTTCCAAGAAAGAATGGAAAAGGCAGAAAACTACAAACCAAAATGGGAAAAG ATGCAGACGGTGTTTGCTTCGGCGTGA
Upstream 100 bases:
>100_bases AATAACTTTCTGCACAGTTATTAATTGTTAATCAGGAGATAAATTATTAATTGAGACCTTTCTAGTAATACGAAAGGATC ATATAAAATTTTAACTGTAA
Downstream 100 bases:
>100_bases GAATTTTTTTGAGGGATAATTCATGGCAGCAGAACAGGATAAAGAGCAAGACAGCAAGCCAGAAGAGGCCGAAGAAAAGA AAAAAGTCGCTGTATATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK MQTVFASA
Sequences:
>Translated_168_residues MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK MQTVFASA >Mature_168_residues MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNIIEVKECKGNTKKYGLKENSL VNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEENCDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEK MQTVFASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19617; Mature: 19617
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCE IEVKECKGNTKKYGLKENSLVNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEEN EEEHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCC CDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEKMQTVFASA CCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MEEKRMSLVDFLGATSEIKIIDFLAENMDMAYNQTEISECLGISRTVVNQKIPVLIYNNI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCE IEVKECKGNTKKYGLKENSLVNKIIATIYDHSFRMAEYEGDEEEVLSEISDKHQASPEEN EEEHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCC CDCYCGEPRYIEFYETPGYQLDWFQERMEKAENYKPKWEKMQTVFASA CCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA