Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228023

Identifier: 21228023

GI number: 21228023

Start: 2285708

End: 2286046

Strand: Reverse

Name: 21228023

Synonym: MM_1921

Alternate gene names: NA

Gene position: 2286046-2285708 (Counterclockwise)

Preceding gene: 21228024

Following gene: 21228020

Centisome position: 55.81

GC content: 36.87

Gene sequence:

>339_bases
ATGGCAGCAGAACAGGATAAAGAGCAAGACAGCAAGCCAGAAGAGGCCGAAGAAAAGAAAAAAGTCGCTGTATATAGAAC
TCCACTTTTTACTAAATTATATGCAACAAACCTGAGGGTTTCTCCAACAGATGTAGATATCAGGATTGAGTTTTTCAATG
AGAAGGTTAAAACCGAAGAAGGAATAGTATTCTATAGTGACGGCGTGGCAATGTTAACTCCAGAAGCTGCGAAAAAGTTG
TACTTAGAGTTAAAGAATGCCATAGAGAAGTATGAAACAGAAAAAGGAGAAATACAGATAAAAGGAGAAAGGCAAGATTG
TGAGTTTAATGATGAATAA

Upstream 100 bases:

>100_bases
TTCCAAGAAAGAATGGAAAAGGCAGAAAACTACAAACCAAAATGGGAAAAGATGCAGACGGTGTTTGCTTCGGCGTGAGA
ATTTTTTTGAGGGATAATTC

Downstream 100 bases:

>100_bases
TCCTTTTCTTTAATGTAATCTCCTTTTTTACAATTTTCGTAGTTTGCTGCCACATAGGTAAAGAATCCTCTTAATTTTAT
ACCTAGAGGACTTTTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAAEQDKEQDSKPEEAEEKKKVAVYRTPLFTKLYATNLRVSPTDVDIRIEFFNEKVKTEEGIVFYSDGVAMLTPEAAKKL
YLELKNAIEKYETEKGEIQIKGERQDCEFNDE

Sequences:

>Translated_112_residues
MAAEQDKEQDSKPEEAEEKKKVAVYRTPLFTKLYATNLRVSPTDVDIRIEFFNEKVKTEEGIVFYSDGVAMLTPEAAKKL
YLELKNAIEKYETEKGEIQIKGERQDCEFNDE
>Mature_111_residues
AAEQDKEQDSKPEEAEEKKKVAVYRTPLFTKLYATNLRVSPTDVDIRIEFFNEKVKTEEGIVFYSDGVAMLTPEAAKKLY
LELKNAIEKYETEKGEIQIKGERQDCEFNDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12973; Mature: 12841

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEQDKEQDSKPEEAEEKKKVAVYRTPLFTKLYATNLRVSPTDVDIRIEFFNEKVKTEE
CCCCCCCCCCCCCCCHHHHHCEEEEECCHHEEHHHCCCEECCCCEEEEEEEECCCCCCCC
GIVFYSDGVAMLTPEAAKKLYLELKNAIEKYETEKGEIQIKGERQDCEFNDE
CEEEEECCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
AAEQDKEQDSKPEEAEEKKKVAVYRTPLFTKLYATNLRVSPTDVDIRIEFFNEKVKTEE
CCCCCCCCCCCCCCHHHHHCEEEEECCHHEEHHHCCCEECCCCEEEEEEEECCCCCCCC
GIVFYSDGVAMLTPEAAKKLYLELKNAIEKYETEKGEIQIKGERQDCEFNDE
CEEEEECCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA