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The map label for this gene is yhdE [C]

Identifier: 21228012

GI number: 21228012

Start: 2268889

End: 2269572

Strand: Direct

Name: yhdE [C]

Synonym: MM_1910

Alternate gene names: 21228012

Gene position: 2268889-2269572 (Clockwise)

Preceding gene: 21228011

Following gene: 21228013

Centisome position: 55.39

GC content: 44.59

Gene sequence:

>684_bases
ATGAAAACTTGTTTTTCATGGAATTTACCTTTTCATGGAACTTACCTTTTCATGGATAGTGATATATCCTATCCATCCAG
ATTTTTCTCCATGCGCAGGATAATTCTCGCGTCTGCATCCCCAAGGCGGAAAGAACTGCTTAGACAGTTAATCGGAGATA
ATTTCCTTGTCTCCCCCAGTTCTTACGAAGAACCTCCCCAGCCGGATCTCGCCCCTGAAGAACTCCTGATCAGGCACTCC
ATAGGGAAAGCCAGAGATGTTGCAAAACACTTCAGTTCAGGAATTATTATCTCTGCTGATACATCGGTTCTCTATAACGG
TGAGGTTCTGGGAAAGCCAAATTTTCCTGAAAAAGCCGAAGAAATGCTCAAAAAGCTGAATGGGAGAAAGTTCAGGGTAG
TAACCGGGCTTACTGTTCTGGACCTTGACAGTGCTCAGGAAATTAGCGAATCCGAGTCAACTGATGTCTGGATGTCTGAA
ATGGATGACGAACAGATCCTGGCATATGTCAGGACAGGGGAGCCTCTTGACAAAGCAGGGGCTTTTGCAGCTCAGGGAAA
AGGAGCGGTCCTTATAGAGAGGATAGAAGGGGATTTTTTTAATGCAGTTGGGCTCCCTCTTTTTCGGCTTGGAAAAATTC
TGGAAAAGCTTGGAGTATCTGTGTTTGATGAAAGTTTTTCCTGA

Upstream 100 bases:

>100_bases
AGGAGACTTCCTTCTTCACGCAAAAGATGCCTGCGTCCTCCTCGGAAAAACCGAAGACCTCTACAATGTCCGGAAGTTCT
TTGAAAGCATTCAGTAGTGA

Downstream 100 bases:

>100_bases
ATTTCAGTTTTGCTCCGGGTTTCAGGCTCTTCAGCCGGAAAATTGTTTTTCTTGCAAAAGTAATAAAGCAGTTGGAAGCA
ATAAGAAATATAGCTGAATT

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKTCFSWNLPFHGTYLFMDSDISYPSRFFSMRRIILASASPRRKELLRQLIGDNFLVSPSSYEEPPQPDLAPEELLIRHS
IGKARDVAKHFSSGIIISADTSVLYNGEVLGKPNFPEKAEEMLKKLNGRKFRVVTGLTVLDLDSAQEISESESTDVWMSE
MDDEQILAYVRTGEPLDKAGAFAAQGKGAVLIERIEGDFFNAVGLPLFRLGKILEKLGVSVFDESFS

Sequences:

>Translated_227_residues
MKTCFSWNLPFHGTYLFMDSDISYPSRFFSMRRIILASASPRRKELLRQLIGDNFLVSPSSYEEPPQPDLAPEELLIRHS
IGKARDVAKHFSSGIIISADTSVLYNGEVLGKPNFPEKAEEMLKKLNGRKFRVVTGLTVLDLDSAQEISESESTDVWMSE
MDDEQILAYVRTGEPLDKAGAFAAQGKGAVLIERIEGDFFNAVGLPLFRLGKILEKLGVSVFDESFS
>Mature_227_residues
MKTCFSWNLPFHGTYLFMDSDISYPSRFFSMRRIILASASPRRKELLRQLIGDNFLVSPSSYEEPPQPDLAPEELLIRHS
IGKARDVAKHFSSGIIISADTSVLYNGEVLGKPNFPEKAEEMLKKLNGRKFRVVTGLTVLDLDSAQEISESESTDVWMSE
MDDEQILAYVRTGEPLDKAGAFAAQGKGAVLIERIEGDFFNAVGLPLFRLGKILEKLGVSVFDESFS

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=202, Percent_Identity=37.6237623762376, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI291045183, Length=196, Percent_Identity=36.2244897959184, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI291045181, Length=129, Percent_Identity=40.3100775193798, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI310133124, Length=129, Percent_Identity=40.3100775193798, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=40.3225806451613, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=34.9206349206349, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=36.0215053763441, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324685, Length=207, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI78706856, Length=193, Percent_Identity=39.8963730569948, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 25359; Mature: 25359

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTCFSWNLPFHGTYLFMDSDISYPSRFFSMRRIILASASPRRKELLRQLIGDNFLVSPS
CCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC
SYEEPPQPDLAPEELLIRHSIGKARDVAKHFSSGIIISADTSVLYNGEVLGKPNFPEKAE
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEECCEEEECCEEECCCCCCHHHH
EMLKKLNGRKFRVVTGLTVLDLDSAQEISESESTDVWMSEMDDEQILAYVRTGEPLDKAG
HHHHHHCCCEEEEEECEEEEECCCHHHHHCCCCCCHHHHHCCHHHEEEEEECCCCHHHHC
AFAAQGKGAVLIERIEGDFFNAVGLPLFRLGKILEKLGVSVFDESFS
CHHCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure
MKTCFSWNLPFHGTYLFMDSDISYPSRFFSMRRIILASASPRRKELLRQLIGDNFLVSPS
CCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC
SYEEPPQPDLAPEELLIRHSIGKARDVAKHFSSGIIISADTSVLYNGEVLGKPNFPEKAE
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEECCEEEECCEEECCCCCCHHHH
EMLKKLNGRKFRVVTGLTVLDLDSAQEISESESTDVWMSEMDDEQILAYVRTGEPLDKAG
HHHHHHCCCEEEEEECEEEEECCCHHHHHCCCCCCHHHHHCCHHHEEEEEECCCCHHHHC
AFAAQGKGAVLIERIEGDFFNAVGLPLFRLGKILEKLGVSVFDESFS
CHHCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]