Click here to switch to the map view.

The map label for this gene is yddQ [H]

Identifier: 21228009

GI number: 21228009

Start: 2265180

End: 2265722

Strand: Reverse

Name: yddQ [H]

Synonym: MM_1907

Alternate gene names: 21228009

Gene position: 2265722-2265180 (Counterclockwise)

Preceding gene: 21228020

Following gene: 21228007

Centisome position: 55.31

GC content: 45.49

Gene sequence:

>543_bases
ATGAAAGAAACCCTTCTTCTTATTGATATTCAAAACGACTATTTTCCAGGCGGTAGGATGGAACTTGCAGGCATGGAAGA
CGCGTCAAAAAAGGCGGCTGGTCTCCTTAAAGCATTCCGTGCTTCAGGCAAACCGGTATTTTTTATCAAACACCTTTCTA
CCAGGCCCGGAGCTTCCTTTTTCATACCCGGAACTCCCGGAGCGGAAATCCATGACAGCGTCCAGCCCCTATCAGAGGAA
ACAGTTATTGAGAAACATTTCCCGAACAGCTTTTTCCAGACTGAGCTTCTCTCACGGCTGAATGAAGAAAATGTGACAGA
TCTGGTAATCTGCGGGGCAATGAGCCATATGTGTATAGACACAACTGTGAGGGCTGCAAAAGAACTCGGTTTTACATCTA
CCCTGATTGCCGATGCCTGTGCCACTCGTGATCTTAAATTCAAAGATGAACTCCTGCCTGCCAGTACTGTTCATGCATCT
TTCATGGCTGCACTGGATGGAATGTTTGCAAAAGTAATGACCACAGAAGAATATCTTGTATGA

Upstream 100 bases:

>100_bases
ACAGCAAATAAAAAACAGGTCATGCATAAAAATGAGAATTAATTAAAAAGCCTGTGAGAAAACCGTCAAAAATATCATTA
TTGACAGCTTCACTGGCAGT

Downstream 100 bases:

>100_bases
AAATCAATTTTCCATCCTTCTTTTAATTTGGCATGAAAGTTCTCTCAAGTACTTTCATTTTTTGGGCATGTTATTCGAAG
AATATCATGTGTGTTTTTTG

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKETLLLIDIQNDYFPGGRMELAGMEDASKKAAGLLKAFRASGKPVFFIKHLSTRPGASFFIPGTPGAEIHDSVQPLSEE
TVIEKHFPNSFFQTELLSRLNEENVTDLVICGAMSHMCIDTTVRAAKELGFTSTLIADACATRDLKFKDELLPASTVHAS
FMAALDGMFAKVMTTEEYLV

Sequences:

>Translated_180_residues
MKETLLLIDIQNDYFPGGRMELAGMEDASKKAAGLLKAFRASGKPVFFIKHLSTRPGASFFIPGTPGAEIHDSVQPLSEE
TVIEKHFPNSFFQTELLSRLNEENVTDLVICGAMSHMCIDTTVRAAKELGFTSTLIADACATRDLKFKDELLPASTVHAS
FMAALDGMFAKVMTTEEYLV
>Mature_180_residues
MKETLLLIDIQNDYFPGGRMELAGMEDASKKAAGLLKAFRASGKPVFFIKHLSTRPGASFFIPGTPGAEIHDSVQPLSEE
TVIEKHFPNSFFQTELLSRLNEENVTDLVICGAMSHMCIDTTVRAAKELGFTSTLIADACATRDLKFKDELLPASTVHAS
FMAALDGMFAKVMTTEEYLV

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19725; Mature: 19725

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETLLLIDIQNDYFPGGRMELAGMEDASKKAAGLLKAFRASGKPVFFIKHLSTRPGASF
CCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
FIPGTPGAEIHDSVQPLSEETVIEKHFPNSFFQTELLSRLNEENVTDLVICGAMSHMCID
EECCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHH
TTVRAAKELGFTSTLIADACATRDLKFKDELLPASTVHASFMAALDGMFAKVMTTEEYLV
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKETLLLIDIQNDYFPGGRMELAGMEDASKKAAGLLKAFRASGKPVFFIKHLSTRPGASF
CCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
FIPGTPGAEIHDSVQPLSEETVIEKHFPNSFFQTELLSRLNEENVTDLVICGAMSHMCID
EECCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHH
TTVRAAKELGFTSTLIADACATRDLKFKDELLPASTVHASFMAALDGMFAKVMTTEEYLV
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]