Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228020

Identifier: 21228020

GI number: 21228020

Start: 2281765

End: 2284464

Strand: Reverse

Name: 21228020

Synonym: MM_1918

Alternate gene names: NA

Gene position: 2284464-2281765 (Counterclockwise)

Preceding gene: 21228023

Following gene: 21228009

Centisome position: 55.77

GC content: 33.26

Gene sequence:

>2700_bases
ATGCAAATTGTAGATTGTGTTTTGGAACAACATGCTAAGTCAGAGTTTGAAAAATGGGAAAATGAAATTGAAAAAGCTAC
TAAAGAAAATAAAAAATTTGGAGAACTCTTAGGAAATGAAATTGGTAAAGAGAAACGTACTCGTTTTTTTGAGATATGGG
GAACATTAGATCACGAGACTCAATATTCAATTCTTAGACCTCATTTATGGGATGACAAAAAACCTTCAGAAGGATATGAG
AATTTAGCTAAACTCGTAAAAAAAGGTTATATTAAAAAGATTCTTTCAACAAATCTGGAGAATTTACTGGAAAAAGCCCT
GAACAATGTAGGATGCTACCAACCAGATGATTTTGTTGTAGTTGTAAATGGAAAAGATCGACATGAAGAGTTAGTTGAAC
AACTTAATTCCTCTCGCTCTTCATTAAAAATAACAAAATTACATGGCAGCTTAGAATCTCCAAAGAGCTATGCTTTTAAG
CAAGACGAAATCTCTGATTTTGCGAAGAAAATCAAGCCAGATCTTTCTCGATTAATCAACCAAAGCCTCATTATTGTAGG
ATACAGTGGGCAAGACCGAGACGTTGATCTACTTTTTGAAGATGAAGGGAAAGAAATACATTTCGTGAATCCATCAAAAC
CAGAAGCTGAAAGCAGAATTTCCCAGATATTGGCAGTTCGTGGAAAGGGAAAAATAATAGACGGAAACGATGGAAAATTT
GATACTTTTTTTGAGAAATTACTAAAATATGTCGAACTTGAAGAAGAAAGAAGTAATGCTTCAGATTCTGAACCCTCAAT
AGAAGGGTTTTTAAGAAATATAGGTTTTGGAAAAGAATTAGAAAATCCTCGAAGTCGTTACAAAAATTTAACTTCCCTTT
ACGTAAAACCAACAGAGTATAATGAAATATGTTCAAAACTCGAAAAAGATCATGTAATATTCATAATAGGAGAGCCTCAT
TTAGGTAAAACATATACTGCAATCCATTTACTCTGGGAATACTACCAAAAAGGCTACGAAACTCTTCATATAAGGCACGA
TAACTTAGTTACACGGTTACATGAGAATGAAGGTAACCTTACAAATCTCCTTTTATCCTTACTGTCTTCTAAAGATGGAA
ATCCTGTAATTATTCACTTTGATGATCCCTTTGGTGAAACGATGGAACGTCGAACAGACGAGTTTGCCAAGGGATTAAAT
GATTTTTTGTTATTATCCAAGAAATATGAGCATTTGAGAATTATAGTAACCACTAGATTGAATATATTCAGAGAAGCTCT
GGCTGAACAAGATTGCCAAAATATTGAAGGACTTGAGAAAGATCTGAGAGTTCATACCTCATATAAATCGGAAGTTCTGG
TTGATATTTTACATAGATATACTCAGTTTTACAAACCTCTTTGGTCAACAGACGAAAAAATAGTTAGAGAGCTGGATGAA
AAACTACCAAAAATGCTTCCAGCTCCTCACAATATCGAATTCTTTGTAAGAACCTCAGAAAGGCTTACCTCCTTAGAAGA
GATATTTCAACATGTGGATAAATCAAAAGAGATGATTAAAGCTCTCGGAGAATGGATGGCAAGCTTATCTGACCATGAGC
AGATCTTCCTGACGTGGGTAGAAATACAATCAACCTCAAACATACTCTTTACAAATGACTCTGCATCTAAAATAAACCTT
GAAGATGCTTATAGAGAAACTTTAGCTTTTTTGTATAAAAGAAGATACATATTTAGCATTCCTCCAAGTTCATTTTCAGT
TGACAAAGATAAGTTTGATATGATACTTTTGGAAAGTAGAGAAAAAGATTCAGATGTAAGTAAATTTGACTTTGTACACC
CTTCTTACCATGAAGCTTTTTGGTACGCCATAAAAGAGGAGTCAAGATTGCTTTATTGGTGGAGAGTATTAAAAGAAAAC
TTAGCAGGGATATTGGATGACTTGGATAATAAACTGGATCGCGTCCAATTACGTATAATTGAAAATTACGGGACAGTAAA
TAGAGATTTAGATAAATTATTACTTATTTCAGCAGAAAGTGAAGATGTTGACGAAAAGGTTATAGCTCTAAAGCACATGA
TGGAAAGAATCGAAGTATTTGGAGAATCTTATTCATTTTCTTCTTGTATGGAAGCTGTTATTTCAGCACAAGATCCAAAA
CATAGAATGGTACTCGTAAACTTACTTCCCAAAAACTTCAGCACTTTGCCTCCGGGAATTATTGATAAGTCAATGTTGCT
CCTCGTTGATCCCGAAAAAGAAGTTAGGAATAGATACTGGGAGATTTACTCAGACAGAATCGAAATAATTGATAAGCTGG
AAACAAATCCAGAATTTAAGCTAGGAAGGTTAGTAAAAAAAATTCAATTGATAGAATTATTAAATAGGCACCTAAATAAT
AAGTCAATAGAAATAAAAGTGATAAATAGATTTCTTCAGATTACCCTACCTGAATTCAAAATAGTATTTAAGAATAATTT
AGAACTTGGATACGATTTAACTCAATATGCTTATAGCAGCGGGGGAATCTTGCGTCGAAGCCTATCTAATACACAAAAGG
AAAACATAAAATATATTGAAGAGTATATTATAACAAATTTGCACGATGATCGTTTCCTACAGAAAAGAAGTGCTAGATTA
GTAGTAAATGCATTAGAAAGAGCGCGAATGAATAAAACTAGAGCTACAATGAAAAAATGA

Upstream 100 bases:

>100_bases
TTTAGCTAGCAGCATGGTTTCAAGGAAAATCTCAGGTGCTGATCCATATATTTTGTTTCTCGGTGCCGGAGCGTCCATAA
GTTCGGGATGCTCAAGTATG

Downstream 100 bases:

>100_bases
AAATGGGTTTTAAAAATTACTTAGGAGTCGTCACAGAACAAACAATGCACAGGTTTCGATTGGATGTCTTGATTTTCAAG
ATCATTATCACCAATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 899; Mature: 899

Protein sequence:

>899_residues
MQIVDCVLEQHAKSEFEKWENEIEKATKENKKFGELLGNEIGKEKRTRFFEIWGTLDHETQYSILRPHLWDDKKPSEGYE
NLAKLVKKGYIKKILSTNLENLLEKALNNVGCYQPDDFVVVVNGKDRHEELVEQLNSSRSSLKITKLHGSLESPKSYAFK
QDEISDFAKKIKPDLSRLINQSLIIVGYSGQDRDVDLLFEDEGKEIHFVNPSKPEAESRISQILAVRGKGKIIDGNDGKF
DTFFEKLLKYVELEEERSNASDSEPSIEGFLRNIGFGKELENPRSRYKNLTSLYVKPTEYNEICSKLEKDHVIFIIGEPH
LGKTYTAIHLLWEYYQKGYETLHIRHDNLVTRLHENEGNLTNLLLSLLSSKDGNPVIIHFDDPFGETMERRTDEFAKGLN
DFLLLSKKYEHLRIIVTTRLNIFREALAEQDCQNIEGLEKDLRVHTSYKSEVLVDILHRYTQFYKPLWSTDEKIVRELDE
KLPKMLPAPHNIEFFVRTSERLTSLEEIFQHVDKSKEMIKALGEWMASLSDHEQIFLTWVEIQSTSNILFTNDSASKINL
EDAYRETLAFLYKRRYIFSIPPSSFSVDKDKFDMILLESREKDSDVSKFDFVHPSYHEAFWYAIKEESRLLYWWRVLKEN
LAGILDDLDNKLDRVQLRIIENYGTVNRDLDKLLLISAESEDVDEKVIALKHMMERIEVFGESYSFSSCMEAVISAQDPK
HRMVLVNLLPKNFSTLPPGIIDKSMLLLVDPEKEVRNRYWEIYSDRIEIIDKLETNPEFKLGRLVKKIQLIELLNRHLNN
KSIEIKVINRFLQITLPEFKIVFKNNLELGYDLTQYAYSSGGILRRSLSNTQKENIKYIEEYIITNLHDDRFLQKRSARL
VVNALERARMNKTRATMKK

Sequences:

>Translated_899_residues
MQIVDCVLEQHAKSEFEKWENEIEKATKENKKFGELLGNEIGKEKRTRFFEIWGTLDHETQYSILRPHLWDDKKPSEGYE
NLAKLVKKGYIKKILSTNLENLLEKALNNVGCYQPDDFVVVVNGKDRHEELVEQLNSSRSSLKITKLHGSLESPKSYAFK
QDEISDFAKKIKPDLSRLINQSLIIVGYSGQDRDVDLLFEDEGKEIHFVNPSKPEAESRISQILAVRGKGKIIDGNDGKF
DTFFEKLLKYVELEEERSNASDSEPSIEGFLRNIGFGKELENPRSRYKNLTSLYVKPTEYNEICSKLEKDHVIFIIGEPH
LGKTYTAIHLLWEYYQKGYETLHIRHDNLVTRLHENEGNLTNLLLSLLSSKDGNPVIIHFDDPFGETMERRTDEFAKGLN
DFLLLSKKYEHLRIIVTTRLNIFREALAEQDCQNIEGLEKDLRVHTSYKSEVLVDILHRYTQFYKPLWSTDEKIVRELDE
KLPKMLPAPHNIEFFVRTSERLTSLEEIFQHVDKSKEMIKALGEWMASLSDHEQIFLTWVEIQSTSNILFTNDSASKINL
EDAYRETLAFLYKRRYIFSIPPSSFSVDKDKFDMILLESREKDSDVSKFDFVHPSYHEAFWYAIKEESRLLYWWRVLKEN
LAGILDDLDNKLDRVQLRIIENYGTVNRDLDKLLLISAESEDVDEKVIALKHMMERIEVFGESYSFSSCMEAVISAQDPK
HRMVLVNLLPKNFSTLPPGIIDKSMLLLVDPEKEVRNRYWEIYSDRIEIIDKLETNPEFKLGRLVKKIQLIELLNRHLNN
KSIEIKVINRFLQITLPEFKIVFKNNLELGYDLTQYAYSSGGILRRSLSNTQKENIKYIEEYIITNLHDDRFLQKRSARL
VVNALERARMNKTRATMKK
>Mature_899_residues
MQIVDCVLEQHAKSEFEKWENEIEKATKENKKFGELLGNEIGKEKRTRFFEIWGTLDHETQYSILRPHLWDDKKPSEGYE
NLAKLVKKGYIKKILSTNLENLLEKALNNVGCYQPDDFVVVVNGKDRHEELVEQLNSSRSSLKITKLHGSLESPKSYAFK
QDEISDFAKKIKPDLSRLINQSLIIVGYSGQDRDVDLLFEDEGKEIHFVNPSKPEAESRISQILAVRGKGKIIDGNDGKF
DTFFEKLLKYVELEEERSNASDSEPSIEGFLRNIGFGKELENPRSRYKNLTSLYVKPTEYNEICSKLEKDHVIFIIGEPH
LGKTYTAIHLLWEYYQKGYETLHIRHDNLVTRLHENEGNLTNLLLSLLSSKDGNPVIIHFDDPFGETMERRTDEFAKGLN
DFLLLSKKYEHLRIIVTTRLNIFREALAEQDCQNIEGLEKDLRVHTSYKSEVLVDILHRYTQFYKPLWSTDEKIVRELDE
KLPKMLPAPHNIEFFVRTSERLTSLEEIFQHVDKSKEMIKALGEWMASLSDHEQIFLTWVEIQSTSNILFTNDSASKINL
EDAYRETLAFLYKRRYIFSIPPSSFSVDKDKFDMILLESREKDSDVSKFDFVHPSYHEAFWYAIKEESRLLYWWRVLKEN
LAGILDDLDNKLDRVQLRIIENYGTVNRDLDKLLLISAESEDVDEKVIALKHMMERIEVFGESYSFSSCMEAVISAQDPK
HRMVLVNLLPKNFSTLPPGIIDKSMLLLVDPEKEVRNRYWEIYSDRIEIIDKLETNPEFKLGRLVKKIQLIELLNRHLNN
KSIEIKVINRFLQITLPEFKIVFKNNLELGYDLTQYAYSSGGILRRSLSNTQKENIKYIEEYIITNLHDDRFLQKRSARL
VVNALERARMNKTRATMKK

Specific function: Unknown

COG id: COG5635

COG function: function code T; Predicted NTPase (NACHT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105188; Mature: 105188

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVDCVLEQHAKSEFEKWENEIEKATKENKKFGELLGNEIGKEKRTRFFEIWGTLDHET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC
QYSILRPHLWDDKKPSEGYENLAKLVKKGYIKKILSTNLENLLEKALNNVGCYQPDDFVV
CHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VVNGKDRHEELVEQLNSSRSSLKITKLHGSLESPKSYAFKQDEISDFAKKIKPDLSRLIN
EECCCCHHHHHHHHHHCCHHCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC
QSLIIVGYSGQDRDVDLLFEDEGKEIHFVNPSKPEAESRISQILAVRGKGKIIDGNDGKF
CCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCH
DTFFEKLLKYVELEEERSNASDSEPSIEGFLRNIGFGKELENPRSRYKNLTSLYVKPTEY
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHEEECCCCH
NEICSKLEKDHVIFIIGEPHLGKTYTAIHLLWEYYQKGYETLHIRHDNLVTRLHENEGNL
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCHH
TNLLLSLLSSKDGNPVIIHFDDPFGETMERRTDEFAKGLNDFLLLSKKYEHLRIIVTTRL
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEHHHH
NIFREALAEQDCQNIEGLEKDLRVHTSYKSEVLVDILHRYTQFYKPLWSTDEKIVRELDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KLPKMLPAPHNIEFFVRTSERLTSLEEIFQHVDKSKEMIKALGEWMASLSDHEQIFLTWV
HHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
EIQSTSNILFTNDSASKINLEDAYRETLAFLYKRRYIFSIPPSSFSVDKDKFDMILLESR
EEECCCCEEEECCCCCEECHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCEEEEECC
EKDSDVSKFDFVHPSYHEAFWYAIKEESRLLYWWRVLKENLAGILDDLDNKLDRVQLRII
CCCCCCCHHCCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENYGTVNRDLDKLLLISAESEDVDEKVIALKHMMERIEVFGESYSFSSCMEAVISAQDPK
HHCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
HRMVLVNLLPKNFSTLPPGIIDKSMLLLVDPEKEVRNRYWEIYSDRIEIIDKLETNPEFK
CEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LGRLVKKIQLIELLNRHLNNKSIEIKVINRFLQITLPEFKIVFKNNLELGYDLTQYAYSS
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
GGILRRSLSNTQKENIKYIEEYIITNLHDDRFLQKRSARLVVNALERARMNKTRATMKK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIVDCVLEQHAKSEFEKWENEIEKATKENKKFGELLGNEIGKEKRTRFFEIWGTLDHET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC
QYSILRPHLWDDKKPSEGYENLAKLVKKGYIKKILSTNLENLLEKALNNVGCYQPDDFVV
CHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VVNGKDRHEELVEQLNSSRSSLKITKLHGSLESPKSYAFKQDEISDFAKKIKPDLSRLIN
EECCCCHHHHHHHHHHCCHHCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC
QSLIIVGYSGQDRDVDLLFEDEGKEIHFVNPSKPEAESRISQILAVRGKGKIIDGNDGKF
CCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCH
DTFFEKLLKYVELEEERSNASDSEPSIEGFLRNIGFGKELENPRSRYKNLTSLYVKPTEY
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHEEECCCCH
NEICSKLEKDHVIFIIGEPHLGKTYTAIHLLWEYYQKGYETLHIRHDNLVTRLHENEGNL
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCHH
TNLLLSLLSSKDGNPVIIHFDDPFGETMERRTDEFAKGLNDFLLLSKKYEHLRIIVTTRL
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEHHHH
NIFREALAEQDCQNIEGLEKDLRVHTSYKSEVLVDILHRYTQFYKPLWSTDEKIVRELDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KLPKMLPAPHNIEFFVRTSERLTSLEEIFQHVDKSKEMIKALGEWMASLSDHEQIFLTWV
HHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
EIQSTSNILFTNDSASKINLEDAYRETLAFLYKRRYIFSIPPSSFSVDKDKFDMILLESR
EEECCCCEEEECCCCCEECHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCEEEEECC
EKDSDVSKFDFVHPSYHEAFWYAIKEESRLLYWWRVLKENLAGILDDLDNKLDRVQLRII
CCCCCCCHHCCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENYGTVNRDLDKLLLISAESEDVDEKVIALKHMMERIEVFGESYSFSSCMEAVISAQDPK
HHCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
HRMVLVNLLPKNFSTLPPGIIDKSMLLLVDPEKEVRNRYWEIYSDRIEIIDKLETNPEFK
CEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LGRLVKKIQLIELLNRHLNNKSIEIKVINRFLQITLPEFKIVFKNNLELGYDLTQYAYSS
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
GGILRRSLSNTQKENIKYIEEYIITNLHDDRFLQKRSARLVVNALERARMNKTRATMKK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA