| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is glpE [H]
Identifier: 21228006
GI number: 21228006
Start: 2263194
End: 2263637
Strand: Direct
Name: glpE [H]
Synonym: MM_1904
Alternate gene names: 21228006
Gene position: 2263194-2263637 (Clockwise)
Preceding gene: 21228003
Following gene: 21228008
Centisome position: 55.25
GC content: 43.24
Gene sequence:
>444_bases TTGAACAAACAGAATTTAGTGTATTTAGCCTCTTTTTTAGTAATTTTGATTGCAATACTGATTTTTGCCCCGCGGGGTGG AGACCGTCCTTCGGGGTTTACAAACGTAAGCGTTGAAGAAGCAAAGGAACTGCTCGACGAAGAAGATGTATTTTTACTTG ATGTCCGAACGCCTCCTGAGTTTAATTCTTTTCATATTGAAGGTGCAACCCTGATCCCTGTAACTAACTCGTCCGGGTCC AGTCTAAGTTCTGATAAACTGCTTGAAGCACGGGTGGACGAAGTTCCTGAAAACAAAAAAATACTGGTTTACTGCAGATC AGGGCACAGAAGCATTTCAGCGAGTAAGATCCTTGTGAATGCCGGATATTCACAGGTATACAATATGGAAGGAGGCATTA ACGCCTGGACAGGTGCAGGGTATCCGGTTGTAAGTTCGGAATAA
Upstream 100 bases:
>100_bases ATGTAAGCCTGTTATTATCCGATGACTGCTTAAGAGGTCCTTGACTGTTCTGGGCTCTCTTATTTTTGTCTTTATCAATT CAATAGGGAGGAGCCTTTGA
Downstream 100 bases:
>100_bases CCAGGAAACTGCAATCTTTTGATATCTCCATTATTTACGAAGAAAGATGATTTATTCATCTCTGTTTCATAGCTCAGAAA ATCAGTGCGTTTTCACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE
Sequences:
>Translated_147_residues MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE >Mature_147_residues MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE
Specific function: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide [H]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 15993; Mature: 15993
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC FNSFHIEGATLIPVTNSSGSSLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVN CCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE AGYSQVYNMEGGINAWTGAGYPVVSSE CCCHHEEECCCCCCCCCCCCCCEECCC >Mature Secondary Structure MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC FNSFHIEGATLIPVTNSSGSSLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVN CCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE AGYSQVYNMEGGINAWTGAGYPVVSSE CCCHHEEECCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA