Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is glpE [H]

Identifier: 21228006

GI number: 21228006

Start: 2263194

End: 2263637

Strand: Direct

Name: glpE [H]

Synonym: MM_1904

Alternate gene names: 21228006

Gene position: 2263194-2263637 (Clockwise)

Preceding gene: 21228003

Following gene: 21228008

Centisome position: 55.25

GC content: 43.24

Gene sequence:

>444_bases
TTGAACAAACAGAATTTAGTGTATTTAGCCTCTTTTTTAGTAATTTTGATTGCAATACTGATTTTTGCCCCGCGGGGTGG
AGACCGTCCTTCGGGGTTTACAAACGTAAGCGTTGAAGAAGCAAAGGAACTGCTCGACGAAGAAGATGTATTTTTACTTG
ATGTCCGAACGCCTCCTGAGTTTAATTCTTTTCATATTGAAGGTGCAACCCTGATCCCTGTAACTAACTCGTCCGGGTCC
AGTCTAAGTTCTGATAAACTGCTTGAAGCACGGGTGGACGAAGTTCCTGAAAACAAAAAAATACTGGTTTACTGCAGATC
AGGGCACAGAAGCATTTCAGCGAGTAAGATCCTTGTGAATGCCGGATATTCACAGGTATACAATATGGAAGGAGGCATTA
ACGCCTGGACAGGTGCAGGGTATCCGGTTGTAAGTTCGGAATAA

Upstream 100 bases:

>100_bases
ATGTAAGCCTGTTATTATCCGATGACTGCTTAAGAGGTCCTTGACTGTTCTGGGCTCTCTTATTTTTGTCTTTATCAATT
CAATAGGGAGGAGCCTTTGA

Downstream 100 bases:

>100_bases
CCAGGAAACTGCAATCTTTTGATATCTCCATTATTTACGAAGAAAGATGATTTATTCATCTCTGTTTCATAGCTCAGAAA
ATCAGTGCGTTTTCACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS
SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE

Sequences:

>Translated_147_residues
MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS
SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE
>Mature_147_residues
MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPEFNSFHIEGATLIPVTNSSGS
SLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVNAGYSQVYNMEGGINAWTGAGYPVVSSE

Specific function: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide [H]

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 15993; Mature: 15993

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
FNSFHIEGATLIPVTNSSGSSLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVN
CCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE
AGYSQVYNMEGGINAWTGAGYPVVSSE
CCCHHEEECCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MNKQNLVYLASFLVILIAILIFAPRGGDRPSGFTNVSVEEAKELLDEEDVFLLDVRTPPE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
FNSFHIEGATLIPVTNSSGSSLSSDKLLEARVDEVPENKKILVYCRSGHRSISASKILVN
CCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE
AGYSQVYNMEGGINAWTGAGYPVVSSE
CCCHHEEECCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA