Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227972

Identifier: 21227972

GI number: 21227972

Start: 2220642

End: 2222825

Strand: Direct

Name: 21227972

Synonym: MM_1870

Alternate gene names: NA

Gene position: 2220642-2222825 (Clockwise)

Preceding gene: 21227971

Following gene: 21227976

Centisome position: 54.21

GC content: 47.48

Gene sequence:

>2184_bases
ATGACACCCGGTGGGGTAAGTTCAATGACATATGAAGATGCCGATATTTTCGCTTTTATTTCCAAAAAATCCAGGCCGGT
TTCTGCTCCTGAAAAGGTTACTGTTTCGGAAAATGAGACACTTTCAGGCGGGAACTCAGCGTCAAAAATAAGTCCCGAAA
ATGAGATCGGGGGTCGGGAAAAAGAGCTCTTTAAAGAAATCTCTGGTTCTGAAGAAAGCTCTGATCCTGCCACAAAGCCA
GCTTTTGAAGAGCTCCCCGTTCCTTTACCTGAGACTGTTACGGAAACTGACATACAGAACCCTTCAGGTAGTGATTCAAA
AGCATTTTCAAGCACTTTTTCAGGCGCTTCTGAACTTTCCGGGCTTTCCAGAGCTGTCCCGGCACCTGCTTCCTCTTTTT
ATCCTGAAGACTCTTATCCTGCCGATTTTTCCGAAAAGGAAGAACTTCCGTTTGAAAAGTTTGAAGACTATGATTTCGGA
ATTTCCGGAGCCCCTCCGTCCCTGGTTGAAGCCTTCGGAATTGTAACAACCGGTATAGAACCTCTGGAAATAACGCCTTC
GGCAGCCACAATTACTGGGTATATTGCTTCTGCCCGCAGGAGTGAGATCAGGCTCGGAACATATGTTGTTGTGCCTTATG
AAGATGGAGAAAAGCTCTTTGCAAGGGTAGGGAAGCTCCAGTACAGGCAGGAGTTTGCAGTGGATGATGCGACCGAAATC
CATTCAAGGCGCATGTTGAATGCCCGTGCAAGCCCCATAAACGAAGCCGACTACAAGTTTCTTGCCTGCCTTGATCCTCT
CTGTATCCTGTATCGAAAAAAAACAGAGGGAGCACTTACACGCAGGATGGCAGACAGAATTCCCCGTCCGAACACGCCCA
TACTGCCTGTAACGGACAGGCTTGAAGTCCAGACAGGGCTGAACATCCCGGAAGAAGGTGTTTTCCTCGGGCATTTAAGT
GTCGGGGGAGAGCTTGTAAAAACACATTCCGAGCCCGAAACCGTTGCTTATTATCTCAGAAACGATTATTCGATGGGCGA
CCCCCTTATTTTCAGGCATATGCTTATCTGCGGGAGCACAGGGACAGGAAAGACCTTCCTATCAAAAAATATTCTGCGCC
AGTTCATGACCGAAAGTAACCGTTACAGGCTGCGGAATGCTTCTGATAAAGCGAGGAAAAATCCCTGTCTCGTGATTATG
GACCCTCAGGATGAGTATTCCCAGATTTTCGAGGACAACGAAACCCTGACTGATGACGACAGATTCAGGTTTGAATCCGA
AAATGTCGCCTGCGGCAGGGTCCAGTCAACAAAGGCTTTTGTAGCAAAGGTTGACGGACAGAAGTATCCCGGAGATAAGT
CAAGGGCAGAGCAGATTGAATTTACAATTCCTTTTTCCTTTGTGGAACATAACTCCTGGCTGATCGCAGCAACAGGAATG
TCCGAACTTCAGTACATCGGGCTTGAAGTGCTCCTTGGGGACTTTTTCAAGTCAAGTGTGCCGCATACCTACCAGAACTT
TATAAGCCACATTGAAAACGAAGGCACACGTTCTTATTACGTTGACAGCAACAGGATCCATGAGTCTTCTTATGATGGGA
TCGTGAGGAGAGTAAGCAGCAGATTCTTCTCAAAAGTCTTTGACCGCGATGCAACCCCGATTTCCGACATTGTTGACAAA
ATCTTCAAGCCGGGACAGATTTCGGTTTTCCCGACAGAATACATAAGCTCCCCGAGGATAAGGGATCTCATAGTTCTCAC
AATCATGAGCATGATTGTTGACAACAAGCTCAACACCACAGGGATCGATGCCATCAAGGAAACTCCGATTATCCTGGCGC
TGGACGAGGCTCACCGCTACCTTTCAAAGGCAAACGGGGAACATGCTCGCCTTATAATTTCCCGTTTTGCAGACGCAGCC
CGCCAGGGAAGAAAAGAAGCTCTCGGGCTCTTTTTGATCACGCAAGACCCGCAGGACATCGATGACACTGTTATCAAGCA
GATCAACACAAAGCTGATCCTTAACCTCAATAACGATGCTGCAATCTCTTCCCTGAAAGTCCCCAAGGAATACGAACGCA
GGATTCCCTACCTTAAGAAAGGGCAGATGATAATCCACAGCCCGGACAACAGTGATATTGTGGAAATCCTGGGGCTTTCA
AGCTGTGTTGTAAGGCACCGCTAA

Upstream 100 bases:

>100_bases
CTTACCCTCACAAAGGCAGACCACCTCGCAAAAATCCGGAAAGTGGAGAGGCAGGAAATCGATAAATTCTTTGAAAGCAT
GAGTCCTGATACAACTTATA

Downstream 100 bases:

>100_bases
GAAAAACAGAAAATTGAAAATTAACGAACCTAATTTTGAAGAACAAGTTTCAGCGCATGCCTGCCTTATGAAGTAAGGCG
TGTGTCTCTTCTTTTTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase-Like Protein; Tubulin

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTPGGVSSMTYEDADIFAFISKKSRPVSAPEKVTVSENETLSGGNSASKISPENEIGGREKELFKEISGSEESSDPATKP
AFEELPVPLPETVTETDIQNPSGSDSKAFSSTFSGASELSGLSRAVPAPASSFYPEDSYPADFSEKEELPFEKFEDYDFG
ISGAPPSLVEAFGIVTTGIEPLEITPSAATITGYIASARRSEIRLGTYVVVPYEDGEKLFARVGKLQYRQEFAVDDATEI
HSRRMLNARASPINEADYKFLACLDPLCILYRKKTEGALTRRMADRIPRPNTPILPVTDRLEVQTGLNIPEEGVFLGHLS
VGGELVKTHSEPETVAYYLRNDYSMGDPLIFRHMLICGSTGTGKTFLSKNILRQFMTESNRYRLRNASDKARKNPCLVIM
DPQDEYSQIFEDNETLTDDDRFRFESENVACGRVQSTKAFVAKVDGQKYPGDKSRAEQIEFTIPFSFVEHNSWLIAATGM
SELQYIGLEVLLGDFFKSSVPHTYQNFISHIENEGTRSYYVDSNRIHESSYDGIVRRVSSRFFSKVFDRDATPISDIVDK
IFKPGQISVFPTEYISSPRIRDLIVLTIMSMIVDNKLNTTGIDAIKETPIILALDEAHRYLSKANGEHARLIISRFADAA
RQGRKEALGLFLITQDPQDIDDTVIKQINTKLILNLNNDAAISSLKVPKEYERRIPYLKKGQMIIHSPDNSDIVEILGLS
SCVVRHR

Sequences:

>Translated_727_residues
MTPGGVSSMTYEDADIFAFISKKSRPVSAPEKVTVSENETLSGGNSASKISPENEIGGREKELFKEISGSEESSDPATKP
AFEELPVPLPETVTETDIQNPSGSDSKAFSSTFSGASELSGLSRAVPAPASSFYPEDSYPADFSEKEELPFEKFEDYDFG
ISGAPPSLVEAFGIVTTGIEPLEITPSAATITGYIASARRSEIRLGTYVVVPYEDGEKLFARVGKLQYRQEFAVDDATEI
HSRRMLNARASPINEADYKFLACLDPLCILYRKKTEGALTRRMADRIPRPNTPILPVTDRLEVQTGLNIPEEGVFLGHLS
VGGELVKTHSEPETVAYYLRNDYSMGDPLIFRHMLICGSTGTGKTFLSKNILRQFMTESNRYRLRNASDKARKNPCLVIM
DPQDEYSQIFEDNETLTDDDRFRFESENVACGRVQSTKAFVAKVDGQKYPGDKSRAEQIEFTIPFSFVEHNSWLIAATGM
SELQYIGLEVLLGDFFKSSVPHTYQNFISHIENEGTRSYYVDSNRIHESSYDGIVRRVSSRFFSKVFDRDATPISDIVDK
IFKPGQISVFPTEYISSPRIRDLIVLTIMSMIVDNKLNTTGIDAIKETPIILALDEAHRYLSKANGEHARLIISRFADAA
RQGRKEALGLFLITQDPQDIDDTVIKQINTKLILNLNNDAAISSLKVPKEYERRIPYLKKGQMIIHSPDNSDIVEILGLS
SCVVRHR
>Mature_726_residues
TPGGVSSMTYEDADIFAFISKKSRPVSAPEKVTVSENETLSGGNSASKISPENEIGGREKELFKEISGSEESSDPATKPA
FEELPVPLPETVTETDIQNPSGSDSKAFSSTFSGASELSGLSRAVPAPASSFYPEDSYPADFSEKEELPFEKFEDYDFGI
SGAPPSLVEAFGIVTTGIEPLEITPSAATITGYIASARRSEIRLGTYVVVPYEDGEKLFARVGKLQYRQEFAVDDATEIH
SRRMLNARASPINEADYKFLACLDPLCILYRKKTEGALTRRMADRIPRPNTPILPVTDRLEVQTGLNIPEEGVFLGHLSV
GGELVKTHSEPETVAYYLRNDYSMGDPLIFRHMLICGSTGTGKTFLSKNILRQFMTESNRYRLRNASDKARKNPCLVIMD
PQDEYSQIFEDNETLTDDDRFRFESENVACGRVQSTKAFVAKVDGQKYPGDKSRAEQIEFTIPFSFVEHNSWLIAATGMS
ELQYIGLEVLLGDFFKSSVPHTYQNFISHIENEGTRSYYVDSNRIHESSYDGIVRRVSSRFFSKVFDRDATPISDIVDKI
FKPGQISVFPTEYISSPRIRDLIVLTIMSMIVDNKLNTTGIDAIKETPIILALDEAHRYLSKANGEHARLIISRFADAAR
QGRKEALGLFLITQDPQDIDDTVIKQINTKLILNLNNDAAISSLKVPKEYERRIPYLKKGQMIIHSPDNSDIVEILGLSS
CVVRHR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81058; Mature: 80927

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGGVSSMTYEDADIFAFISKKSRPVSAPEKVTVSENETLSGGNSASKISPENEIGGRE
CCCCCCCCCEECCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCHH
KELFKEISGSEESSDPATKPAFEELPVPLPETVTETDIQNPSGSDSKAFSSTFSGASELS
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCHHHHH
GLSRAVPAPASSFYPEDSYPADFSEKEELPFEKFEDYDFGISGAPPSLVEAFGIVTTGIE
HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
PLEITPSAATITGYIASARRSEIRLGTYVVVPYEDGEKLFARVGKLQYRQEFAVDDATEI
CEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHH
HSRRMLNARASPINEADYKFLACLDPLCILYRKKTEGALTRRMADRIPRPNTPILPVTDR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCC
LEVQTGLNIPEEGVFLGHLSVGGELVKTHSEPETVAYYLRNDYSMGDPLIFRHMLICGST
EEHHCCCCCCCCCEEEEEECCCCHHEECCCCCHHEEEEECCCCCCCCHHHHHHHHHCCCC
GTGKTFLSKNILRQFMTESNRYRLRNASDKARKNPCLVIMDPQDEYSQIFEDNETLTDDD
CCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCEEEEECCCHHHHHHHCCCCCCCCCC
RFRFESENVACGRVQSTKAFVAKVDGQKYPGDKSRAEQIEFTIPFSFVEHNSWLIAATGM
CEEECCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECEEEEECCCEEEEECCH
SELQYIGLEVLLGDFFKSSVPHTYQNFISHIENEGTRSYYVDSNRIHESSYDGIVRRVSS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
RFFSKVFDRDATPISDIVDKIFKPGQISVFPTEYISSPRIRDLIVLTIMSMIVDNKLNTT
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
GIDAIKETPIILALDEAHRYLSKANGEHARLIISRFADAARQGRKEALGLFLITQDPQDI
CCHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEEEEEEEECCCCCH
DDTVIKQINTKLILNLNNDAAISSLKVPKEYERRIPYLKKGQMIIHSPDNSDIVEILGLS
HHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
SCVVRHR
HHHHCCC
>Mature Secondary Structure 
TPGGVSSMTYEDADIFAFISKKSRPVSAPEKVTVSENETLSGGNSASKISPENEIGGRE
CCCCCCCCEECCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCHH
KELFKEISGSEESSDPATKPAFEELPVPLPETVTETDIQNPSGSDSKAFSSTFSGASELS
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCHHHHH
GLSRAVPAPASSFYPEDSYPADFSEKEELPFEKFEDYDFGISGAPPSLVEAFGIVTTGIE
HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
PLEITPSAATITGYIASARRSEIRLGTYVVVPYEDGEKLFARVGKLQYRQEFAVDDATEI
CEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHH
HSRRMLNARASPINEADYKFLACLDPLCILYRKKTEGALTRRMADRIPRPNTPILPVTDR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCC
LEVQTGLNIPEEGVFLGHLSVGGELVKTHSEPETVAYYLRNDYSMGDPLIFRHMLICGST
EEHHCCCCCCCCCEEEEEECCCCHHEECCCCCHHEEEEECCCCCCCCHHHHHHHHHCCCC
GTGKTFLSKNILRQFMTESNRYRLRNASDKARKNPCLVIMDPQDEYSQIFEDNETLTDDD
CCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCEEEEECCCHHHHHHHCCCCCCCCCC
RFRFESENVACGRVQSTKAFVAKVDGQKYPGDKSRAEQIEFTIPFSFVEHNSWLIAATGM
CEEECCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECEEEEECCCEEEEECCH
SELQYIGLEVLLGDFFKSSVPHTYQNFISHIENEGTRSYYVDSNRIHESSYDGIVRRVSS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
RFFSKVFDRDATPISDIVDKIFKPGQISVFPTEYISSPRIRDLIVLTIMSMIVDNKLNTT
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
GIDAIKETPIILALDEAHRYLSKANGEHARLIISRFADAARQGRKEALGLFLITQDPQDI
CCHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEEEEEEEECCCCCH
DDTVIKQINTKLILNLNNDAAISSLKVPKEYERRIPYLKKGQMIIHSPDNSDIVEILGLS
HHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
SCVVRHR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA