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The map label for this gene is yfhQ [C]

Identifier: 21227939

GI number: 21227939

Start: 2188729

End: 2189508

Strand: Reverse

Name: yfhQ [C]

Synonym: MM_1837

Alternate gene names: 21227939

Gene position: 2189508-2188729 (Counterclockwise)

Preceding gene: 21227940

Following gene: 21227938

Centisome position: 53.45

GC content: 47.05

Gene sequence:

>780_bases
ATGCGTTCAGGATTGAGAAATTTGTCATTAAATATTCGAGTAGTGCTTGTAGAACCCATGTACCAGGGAAATGTCGGATC
TGTTGCAAGAGCCATGAAAAACTTCGGATACTCCGACCTTGTCCTGATGAACCCCTGCGAACTTGAAGGGCAGGCAAGGG
CAATGTCTTCTCATGCCAGGGACGTGCTTGAAGGGGCAAGGATCGTTTCAACCCTTGAAGAAGCCGTAAAAGGTGCAGAC
CTGCTTATAGGGACTACAGGAGTCTCAAGCCTGAAAACCGGAGAACATATACGCCTCCCTCTTTATACTGTAAAAGAGGT
CAGAGAAAAACTTAAAGGATGCAGCGGCACTATTGCACTCCTTTTCGGGCGTGAGGACAACGGCTTCAGCAATGACGAAC
TGAAAGGATTTGATATGCTTGTCACGGTCCCAACTTCGGAAATATATCCGATTATGAACCTTTCCCACGCAGTTGCAATC
GTGCTTTACGAGCTATCCGGACTCGAAGGAGGAAGCAATCCTCTTGCAGACGGCTTTGACCTCCAGCTCCTTTACGGGCA
TCTGGACGAGCTGCTTGAAGAAATAGATTATCCGGCTCACAAAAAAGACAAAACTTCCCTGATGCTGAGGAGGATATTAG
GAAGGGCAGGGCTGACTCCGAGAGAAGTACAGACTCTCAGGGGCATAATAAGGAAAAGCGAGAGAAAAATGAGGCTTGCG
TCAGGAGTTGAAACCCTGCAAAAAATAGAAGATCCGGGAAGCATAGAAAAGTTCATATGA

Upstream 100 bases:

>100_bases
GGTCTGTGTTGTAAAGGACCCTTCTTACTGTCTGGGGTGCAGGATGTGCACGACTGTCTGCATGGCAGATGCAATTACCC
TTGAAAACTAATTCTAAAAA

Downstream 100 bases:

>100_bases
TAATAAGCTGTCTTATCAGAACCTATTATATCTTATACGTTTTTTTACTTTTTTAAAATCGTTTTCATGTAAAAACAACC
TGATCGAAGATAGAAATTTT

Product: RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRSGLRNLSLNIRVVLVEPMYQGNVGSVARAMKNFGYSDLVLMNPCELEGQARAMSSHARDVLEGARIVSTLEEAVKGAD
LLIGTTGVSSLKTGEHIRLPLYTVKEVREKLKGCSGTIALLFGREDNGFSNDELKGFDMLVTVPTSEIYPIMNLSHAVAI
VLYELSGLEGGSNPLADGFDLQLLYGHLDELLEEIDYPAHKKDKTSLMLRRILGRAGLTPREVQTLRGIIRKSERKMRLA
SGVETLQKIEDPGSIEKFI

Sequences:

>Translated_259_residues
MRSGLRNLSLNIRVVLVEPMYQGNVGSVARAMKNFGYSDLVLMNPCELEGQARAMSSHARDVLEGARIVSTLEEAVKGAD
LLIGTTGVSSLKTGEHIRLPLYTVKEVREKLKGCSGTIALLFGREDNGFSNDELKGFDMLVTVPTSEIYPIMNLSHAVAI
VLYELSGLEGGSNPLADGFDLQLLYGHLDELLEEIDYPAHKKDKTSLMLRRILGRAGLTPREVQTLRGIIRKSERKMRLA
SGVETLQKIEDPGSIEKFI
>Mature_259_residues
MRSGLRNLSLNIRVVLVEPMYQGNVGSVARAMKNFGYSDLVLMNPCELEGQARAMSSHARDVLEGARIVSTLEEAVKGAD
LLIGTTGVSSLKTGEHIRLPLYTVKEVREKLKGCSGTIALLFGREDNGFSNDELKGFDMLVTVPTSEIYPIMNLSHAVAI
VLYELSGLEGGSNPLADGFDLQLLYGHLDELLEEIDYPAHKKDKTSLMLRRILGRAGLTPREVQTLRGIIRKSERKMRLA
SGVETLQKIEDPGSIEKFI

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=247, Percent_Identity=34.8178137651822, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790865, Length=179, Percent_Identity=34.6368715083799, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28514; Mature: 28514

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGLRNLSLNIRVVLVEPMYQGNVGSVARAMKNFGYSDLVLMNPCELEGQARAMSSHAR
CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH
DVLEGARIVSTLEEAVKGADLLIGTTGVSSLKTGEHIRLPLYTVKEVREKLKGCSGTIAL
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEE
LFGREDNGFSNDELKGFDMLVTVPTSEIYPIMNLSHAVAIVLYELSGLEGGSNPLADGFD
EEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
LQLLYGHLDELLEEIDYPAHKKDKTSLMLRRILGRAGLTPREVQTLRGIIRKSERKMRLA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SGVETLQKIEDPGSIEKFI
HHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure
MRSGLRNLSLNIRVVLVEPMYQGNVGSVARAMKNFGYSDLVLMNPCELEGQARAMSSHAR
CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH
DVLEGARIVSTLEEAVKGADLLIGTTGVSSLKTGEHIRLPLYTVKEVREKLKGCSGTIAL
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEE
LFGREDNGFSNDELKGFDMLVTVPTSEIYPIMNLSHAVAIVLYELSGLEGGSNPLADGFD
EEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
LQLLYGHLDELLEEIDYPAHKKDKTSLMLRRILGRAGLTPREVQTLRGIIRKSERKMRLA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SGVETLQKIEDPGSIEKFI
HHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]