| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is groES [H]
Identifier: 21227899
GI number: 21227899
Start: 2145972
End: 2146250
Strand: Direct
Name: groES [H]
Synonym: MM_1797
Alternate gene names: 21227899
Gene position: 2145972-2146250 (Clockwise)
Preceding gene: 21227896
Following gene: 21227900
Centisome position: 52.39
GC content: 39.43
Gene sequence:
>279_bases ATGATTGTCAAACCTATTGGCGAACGTGTATTACTCAAGCACCAGAAGAAAGAAGAAGTCACTAAAGGTGGGATCTATAT CCCTGAATCAGCAAGGCAGGAAAAGAAAGAAGGAATTGTTGTCGCTGTGGGGACATTTGAAGATGGGAAAGAACTTCCCC TTAAGAAGGATGACCATGTAATTTACGGGGGATATCAGGCTGATGAGATTGAAATCGATGATGAAAAATATATTTTTGTC GATTTCAAGGATATCCTGGCAACAGTTGTTGAAGAATAA
Upstream 100 bases:
>100_bases GCTTTAAACAGCTCAATTATTCACCGATTTTATGCTGACTTACAGCAGCAAGTTAACCTTCAGCTAATATTAAGGTCGCT TACACATAGGAGGAACAAAA
Downstream 100 bases:
>100_bases TGTCGAATGAGGCCTTTTCTGAAAGTATTGCATCAGTCATATGACGAATTTAAGTAAATCAGGAATCCGATGAATGTCAG ACAGTGATTTCGATAAATCA
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV DFKDILATVVEE
Sequences:
>Translated_92_residues MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV DFKDILATVVEE >Mature_92_residues MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV DFKDILATVVEE
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
None
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10463; Mature: 10463
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHV CCCCCCCCHHHHCCCCHHHHCCCCEECCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEE IYGGYQADEIEIDDEKYIFVDFKDILATVVEE EECCCCCCEEEECCCCEEEEEHHHHHHHHHCC >Mature Secondary Structure MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHV CCCCCCCCHHHHCCCCHHHHCCCCEECCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEE IYGGYQADEIEIDDEKYIFVDFKDILATVVEE EECCCCCCEEEECCCCEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]