Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is groES [H]

Identifier: 21227899

GI number: 21227899

Start: 2145972

End: 2146250

Strand: Direct

Name: groES [H]

Synonym: MM_1797

Alternate gene names: 21227899

Gene position: 2145972-2146250 (Clockwise)

Preceding gene: 21227896

Following gene: 21227900

Centisome position: 52.39

GC content: 39.43

Gene sequence:

>279_bases
ATGATTGTCAAACCTATTGGCGAACGTGTATTACTCAAGCACCAGAAGAAAGAAGAAGTCACTAAAGGTGGGATCTATAT
CCCTGAATCAGCAAGGCAGGAAAAGAAAGAAGGAATTGTTGTCGCTGTGGGGACATTTGAAGATGGGAAAGAACTTCCCC
TTAAGAAGGATGACCATGTAATTTACGGGGGATATCAGGCTGATGAGATTGAAATCGATGATGAAAAATATATTTTTGTC
GATTTCAAGGATATCCTGGCAACAGTTGTTGAAGAATAA

Upstream 100 bases:

>100_bases
GCTTTAAACAGCTCAATTATTCACCGATTTTATGCTGACTTACAGCAGCAAGTTAACCTTCAGCTAATATTAAGGTCGCT
TACACATAGGAGGAACAAAA

Downstream 100 bases:

>100_bases
TGTCGAATGAGGCCTTTTCTGAAAGTATTGCATCAGTCATATGACGAATTTAAGTAAATCAGGAATCCGATGAATGTCAG
ACAGTGATTTCGATAAATCA

Product: co-chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV
DFKDILATVVEE

Sequences:

>Translated_92_residues
MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV
DFKDILATVVEE
>Mature_92_residues
MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHVIYGGYQADEIEIDDEKYIFV
DFKDILATVVEE

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

None

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10463; Mature: 10463

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHV
CCCCCCCCHHHHCCCCHHHHCCCCEECCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEE
IYGGYQADEIEIDDEKYIFVDFKDILATVVEE
EECCCCCCEEEECCCCEEEEEHHHHHHHHHCC
>Mature Secondary Structure
MIVKPIGERVLLKHQKKEEVTKGGIYIPESARQEKKEGIVVAVGTFEDGKELPLKKDDHV
CCCCCCCCHHHHCCCCHHHHCCCCEECCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEE
IYGGYQADEIEIDDEKYIFVDFKDILATVVEE
EECCCCCCEEEECCCCEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]