Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227893

Identifier: 21227893

GI number: 21227893

Start: 2139329

End: 2139940

Strand: Direct

Name: 21227893

Synonym: MM_1791

Alternate gene names: NA

Gene position: 2139329-2139940 (Clockwise)

Preceding gene: 21227892

Following gene: 21227895

Centisome position: 52.23

GC content: 42.81

Gene sequence:

>612_bases
ATGAAACGAACCTCCACGGAATGGAAGCAGAAAAGGGCTGAATTTGTTAAAGGCAAGGTTTGCGCCTGGTGCAGTTCTCC
GGGCCGTCTGTGTGTTTGCACTCCCGGAGTCTCCTCTCCGGCAGAAATCCGCTCAGGTATTTACAATCTTGCTTATACCA
GGTTTAAAGAAGTTTACAGGGAGAAGTACCAGCAATTTGAGTATATTCTGACAGGCAAACACCGCCATAAAAGCCATCCT
GCATGGCACAGGGCTTCAACAATACATAAGATCGAACCTGATCATAGTGACCTTGAAGAACAGATAATTGAGAGGCTTAT
CGAAGACAGGGGAGAAGGAAACTTTAAGCAGCTCTATCATGAATGGCTTGCAGAAAACGGAATTGAAGAACTTATTGAAG
AGGAGATTAAAAAAGCAGAGGAAGAATCCGCATCTTTTGAGCATGCGATTATGCTTTGCAAGAGCTGCCATTTTGCAAGC
ATGAAAGGTATGGAAATCTGTCCCAGATGCAGGAAAAGGTATAAGTCTTCAAGATATGAAACCTGCTTTGACTGCCTTCC
TGAAGAAAAAAAGAAAGATATTCTGGCAAGGCAAAATGAAAAAAAGAGTTGA

Upstream 100 bases:

>100_bases
TATCTAACCTGAAGTAGAGCAAAAAGATATTACTGGTCCAGGAGCACGGGGCACCCAGCTTTAAATATCTTTTACGGCAA
AAGGTCTTGCAGGTATCCGC

Downstream 100 bases:

>100_bases
TTTTAGGGCATGGAGGACCTTTTTGACAGATCCTTTGCCCGGAAATGAGGTTTTATTCAGGATTATTAATGAGAACAAAA
AAGGAACAAAAAAGGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKRTSTEWKQKRAEFVKGKVCAWCSSPGRLCVCTPGVSSPAEIRSGIYNLAYTRFKEVYREKYQQFEYILTGKHRHKSHP
AWHRASTIHKIEPDHSDLEEQIIERLIEDRGEGNFKQLYHEWLAENGIEELIEEEIKKAEEESASFEHAIMLCKSCHFAS
MKGMEICPRCRKRYKSSRYETCFDCLPEEKKKDILARQNEKKS

Sequences:

>Translated_203_residues
MKRTSTEWKQKRAEFVKGKVCAWCSSPGRLCVCTPGVSSPAEIRSGIYNLAYTRFKEVYREKYQQFEYILTGKHRHKSHP
AWHRASTIHKIEPDHSDLEEQIIERLIEDRGEGNFKQLYHEWLAENGIEELIEEEIKKAEEESASFEHAIMLCKSCHFAS
MKGMEICPRCRKRYKSSRYETCFDCLPEEKKKDILARQNEKKS
>Mature_203_residues
MKRTSTEWKQKRAEFVKGKVCAWCSSPGRLCVCTPGVSSPAEIRSGIYNLAYTRFKEVYREKYQQFEYILTGKHRHKSHP
AWHRASTIHKIEPDHSDLEEQIIERLIEDRGEGNFKQLYHEWLAENGIEELIEEEIKKAEEESASFEHAIMLCKSCHFAS
MKGMEICPRCRKRYKSSRYETCFDCLPEEKKKDILARQNEKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTSTEWKQKRAEFVKGKVCAWCSSPGRLCVCTPGVSSPAEIRSGIYNLAYTRFKEVYR
CCCCCHHHHHHHHHHHHCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
EKYQQFEYILTGKHRHKSHPAWHRASTIHKIEPDHSDLEEQIIERLIEDRGEGNFKQLYH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
EWLAENGIEELIEEEIKKAEEESASFEHAIMLCKSCHFASMKGMEICPRCRKRYKSSRYE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
TCFDCLPEEKKKDILARQNEKKS
HHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRTSTEWKQKRAEFVKGKVCAWCSSPGRLCVCTPGVSSPAEIRSGIYNLAYTRFKEVYR
CCCCCHHHHHHHHHHHHCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
EKYQQFEYILTGKHRHKSHPAWHRASTIHKIEPDHSDLEEQIIERLIEDRGEGNFKQLYH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
EWLAENGIEELIEEEIKKAEEESASFEHAIMLCKSCHFASMKGMEICPRCRKRYKSSRYE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
TCFDCLPEEKKKDILARQNEKKS
HHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA