Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227881

Identifier: 21227881

GI number: 21227881

Start: 2123942

End: 2124622

Strand: Reverse

Name: 21227881

Synonym: MM_1779

Alternate gene names: NA

Gene position: 2124622-2123942 (Counterclockwise)

Preceding gene: 21227882

Following gene: 21227880

Centisome position: 51.87

GC content: 48.9

Gene sequence:

>681_bases
ATGAACTCGTCATCGGATAATTATAAAAGGGATATTGAAGTCCGGATCCCTGTAGACTCCATAAATCTTGAAGGCAACCT
GAATATCCCGGAAGGAGCCAGAGGAATTGTTATTTTCGTTCACGGAAGCGGGAGCAGCCGCCACAGCCCGCGAAACCAGT
ACGTTGCAGACGAACTCCGGAGGGCAGGCCTTGGAACACTTTTGTTTGACCTTCTGACAATCGAAGAAGAGAGAATTGAT
ATGATGACTCGCCACCTCCGCTTCGATATTGAGCTCCTTTCAAAGCGCCTGATTGATGTAACCGGATGGGTCTTGAACAG
ACCGGAAACCAGAGGCCTTAATATAGGTTATTTCGGTGCCAGTACAGGGGCTGCAGCCGCACTCATAGCTGCAAAAGAAT
ATGCTACCGCAGTAAAAGCAGTGGTTTCAAGGGGAGGAAGGCCTGACCTTGCCGAAAGTGCCCTGATTCATGTAAAAGCG
CCCACACTGCTTATCGTAGGCGGGAAGGATATTCAGGTGATAGACCTGAATAAATGGGCACTGGAAAGAATAGTCGCACT
GGACAAGGAGTTAAAGATAGTTCCGGGCGCCACACACCTTTTTGAAGAGCCTGGAGCTCTGGAAGAAGTTGCCCGGTTAG
CCGGGAAATGGTTTACAAGATATCTTGCAGATGGGGTTTAA

Upstream 100 bases:

>100_bases
TTCAGCCAGACAACAGATGAAGAAGTCTGTGAGCTGCTGAAGAAAGCACACAGCTTTCCGGCAGAATGAGTTTACAGGTA
AAGAATTCAAAGGGAGAAGC

Downstream 100 bases:

>100_bases
AAAATATCTTGCAGACGGGGTTTAAGAAATATCTTGCAGAAAGAAAATGAAAAGCCTTTATAGAGAAACTTTGAGAAAAT
GTTGAAAGGATTAAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSPRNQYVADELRRAGLGTLLFDLLTIEEERID
MMTRHLRFDIELLSKRLIDVTGWVLNRPETRGLNIGYFGASTGAAAALIAAKEYATAVKAVVSRGGRPDLAESALIHVKA
PTLLIVGGKDIQVIDLNKWALERIVALDKELKIVPGATHLFEEPGALEEVARLAGKWFTRYLADGV

Sequences:

>Translated_226_residues
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSPRNQYVADELRRAGLGTLLFDLLTIEEERID
MMTRHLRFDIELLSKRLIDVTGWVLNRPETRGLNIGYFGASTGAAAALIAAKEYATAVKAVVSRGGRPDLAESALIHVKA
PTLLIVGGKDIQVIDLNKWALERIVALDKELKIVPGATHLFEEPGALEEVARLAGKWFTRYLADGV
>Mature_226_residues
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSPRNQYVADELRRAGLGTLLFDLLTIEEERID
MMTRHLRFDIELLSKRLIDVTGWVLNRPETRGLNIGYFGASTGAAAALIAAKEYATAVKAVVSRGGRPDLAESALIHVKA
PTLLIVGGKDIQVIDLNKWALERIVALDKELKIVPGATHLFEEPGALEEVARLAGKWFTRYLADGV

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR000836 [H]

Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 24809; Mature: 24809

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSPRNQYVADELR
CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
RAGLGTLLFDLLTIEEERIDMMTRHLRFDIELLSKRLIDVTGWVLNRPETRGLNIGYFGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
STGAAAALIAAKEYATAVKAVVSRGGRPDLAESALIHVKAPTLLIVGGKDIQVIDLNKWA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCEEEEEECCHHH
LERIVALDKELKIVPGATHLFEEPGALEEVARLAGKWFTRYLADGV
HHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSSSDNYKRDIEVRIPVDSINLEGNLNIPEGARGIVIFVHGSGSSRHSPRNQYVADELR
CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
RAGLGTLLFDLLTIEEERIDMMTRHLRFDIELLSKRLIDVTGWVLNRPETRGLNIGYFGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
STGAAAALIAAKEYATAVKAVVSRGGRPDLAESALIHVKAPTLLIVGGKDIQVIDLNKWA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCEEEEEECCHHH
LERIVALDKELKIVPGATHLFEEPGALEEVARLAGKWFTRYLADGV
HHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]