Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227882

Identifier: 21227882

GI number: 21227882

Start: 2124654

End: 2125319

Strand: Reverse

Name: 21227882

Synonym: MM_1780

Alternate gene names: NA

Gene position: 2125319-2124654 (Counterclockwise)

Preceding gene: 21227885

Following gene: 21227881

Centisome position: 51.88

GC content: 46.4

Gene sequence:

>666_bases
TTGAAGGGAATGACGGCACACTTTAAAGATAGAGCAGACGCAGGAAAACGGCTGGCTAAAGAACTTTCAAAATATTCAAA
CAGCCCGGACGTGCTGATACTGGCACTTCCTCGGGGAGGAGTTCCCGTAGCTTTTGAAGTCGCAAAAGAACTGAAAGTAA
AAATGGATGTTTTCATAGTGCGAAAGCTGGGAGTTCCTGGAAATGAAGAACTGGCAATGGGAGCAATTGCATCTGAAGAT
GTCCGTGTTTTGAATGAAAATATTATAAAATCCTATAAAATACCTGACAGAGTAATTGCTACGGTGGCTGCAAACGAACT
CAGGGAACTGGAACGCAGAGAGCGCAAATATCGTGGAAGCCGCCCAAAGCCGGATATGGAAGGTATGACTGTAATCCTGA
TAGATGACGGACTTGCAACCGGAGCAACGATGCATGCAGCAGTTGAAGCCCTCAAGACCAAACGCCCGGCTAAGCTGGTA
GTTGCGGTCCCGACCGCTTCCCCTGATATGTGCAAATTCTTTAAAAAAATAGTGGATGAAATGATCTGTGCTACCACTCC
CGAGCCATTTTATGCTGTGGGTGCATGGTATGAGGATTTCAGCCAGACAACAGATGAAGAAGTCTGTGAGCTGCTGAAGA
AAGCACACAGCTTTCCGGCAGAATGA

Upstream 100 bases:

>100_bases
GTATTTCAAGTGCGTAAGTCCTACTATACATTTAAGGGTTCAGACATAGATACTATAAATCAACATAGATCGTCTTATGA
ATTAATCAAGCCAACAGGGG

Downstream 100 bases:

>100_bases
GTTTACAGGTAAAGAATTCAAAGGGAGAAGCATGAACTCGTCATCGGATAATTATAAAAGGGATATTGAAGTCCGGATCC
CTGTAGACTCCATAAATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKGMTAHFKDRADAGKRLAKELSKYSNSPDVLILALPRGGVPVAFEVAKELKVKMDVFIVRKLGVPGNEELAMGAIASED
VRVLNENIIKSYKIPDRVIATVAANELRELERRERKYRGSRPKPDMEGMTVILIDDGLATGATMHAAVEALKTKRPAKLV
VAVPTASPDMCKFFKKIVDEMICATTPEPFYAVGAWYEDFSQTTDEEVCELLKKAHSFPAE

Sequences:

>Translated_221_residues
MKGMTAHFKDRADAGKRLAKELSKYSNSPDVLILALPRGGVPVAFEVAKELKVKMDVFIVRKLGVPGNEELAMGAIASED
VRVLNENIIKSYKIPDRVIATVAANELRELERRERKYRGSRPKPDMEGMTVILIDDGLATGATMHAAVEALKTKRPAKLV
VAVPTASPDMCKFFKKIVDEMICATTPEPFYAVGAWYEDFSQTTDEEVCELLKKAHSFPAE
>Mature_221_residues
MKGMTAHFKDRADAGKRLAKELSKYSNSPDVLILALPRGGVPVAFEVAKELKVKMDVFIVRKLGVPGNEELAMGAIASED
VRVLNENIIKSYKIPDRVIATVAANELRELERRERKYRGSRPKPDMEGMTVILIDDGLATGATMHAAVEALKTKRPAKLV
VAVPTASPDMCKFFKKIVDEMICATTPEPFYAVGAWYEDFSQTTDEEVCELLKKAHSFPAE

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007815
- InterPro:   IPR000836 [H]

Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 24441; Mature: 24441

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGMTAHFKDRADAGKRLAKELSKYSNSPDVLILALPRGGVPVAFEVAKELKVKMDVFIV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RKLGVPGNEELAMGAIASEDVRVLNENIIKSYKIPDRVIATVAANELRELERRERKYRGS
HHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RPKPDMEGMTVILIDDGLATGATMHAAVEALKTKRPAKLVVAVPTASPDMCKFFKKIVDE
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
MICATTPEPFYAVGAWYEDFSQTTDEEVCELLKKAHSFPAE
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGMTAHFKDRADAGKRLAKELSKYSNSPDVLILALPRGGVPVAFEVAKELKVKMDVFIV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RKLGVPGNEELAMGAIASEDVRVLNENIIKSYKIPDRVIATVAANELRELERRERKYRGS
HHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RPKPDMEGMTVILIDDGLATGATMHAAVEALKTKRPAKLVVAVPTASPDMCKFFKKIVDE
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
MICATTPEPFYAVGAWYEDFSQTTDEEVCELLKKAHSFPAE
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]