Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is czcD [H]

Identifier: 21227880

GI number: 21227880

Start: 2122691

End: 2123662

Strand: Reverse

Name: czcD [H]

Synonym: MM_1778

Alternate gene names: 21227880

Gene position: 2123662-2122691 (Counterclockwise)

Preceding gene: 21227881

Following gene: 21227878

Centisome position: 51.84

GC content: 46.19

Gene sequence:

>972_bases
ATGACAGAAACTGATGGTACGGCAAATGAAGTAATATTTCTCTCAGGGGAAAGTGAAGACTCCAGGTATTCTCAGGCAGT
TCACGTAACAAAAGTTTCTGTGGTTTCAAACATCTTGCTGACGTTTTTTAAGTTTTTTGCAGGAATTGTGGGTAATAGTT
CAGCAATGATAGCAGATGCCGTCCATTCCACGTCAGATTTCATGACCGACATCGCAGTAATAGCAGGCCTGAAGGTTGCC
CGAAAGCCCGGAGACAGTACACATAATTACGGGCATGGGAAGATCGAAACCCTGTCTGCTGCATTTATAGGGCTCGTACT
CATTGCAGTAGCTTTCGGGATTTTCTGGGGAGGGCTCGAGAAGGTTATTGCTTTTTACCATGGGGAAATGCTGCCTGCTC
CCAGTGGAATAGCCCTCAGTGCAGCAGTCCTTTCAATTGTAACCAAAGAATGGCTATTCCGCTACACAATAGTATACGCC
CGGGGGCTCAGGAGTGATGCTCTTACTGCAAACGCCTGGCACCACCGTTCTGATGCGTTGTCTTCAATAGGGACAATGAT
AGGGATTGGAGGTGCAGTCCTTCTCGGAGGCAGGTGGGCGGTACTCGACCCCATAGCTGCTGTCATATTGAGTTTTTTTG
TATTCAGAGTGGCAGTCGAGATCTCGTATAAGAATCTCAACGAACTGCTGGAAGCCTCTCTGGATTCTACAACTTACAAA
AGTATTGAGGAAATCCTCATATCCACAGAAGGAGTACTGGGTTTCCATGAGTTAAAGACCCGAAAGATAGGAAATGCGAT
GGCTGCAGATGTACACATAGAAGTGGACAGAAACCTGAATATTGTGGACGCACACGAGATTTCGGTTAAGGTTGAAGACA
GGTTAAAGGAAGTCTGCGGCAAAAACGGTTACTTCTCAATTCACGTAGAACCCTGCCCAGAGCACGAACCGGGATATGGA
AGAAAAAATTAA

Upstream 100 bases:

>100_bases
ATTTATATCTATTGGTAGCCTACTTATATTTTTCAGATAAACACATTAAAAAGAATATATATTTTAATGAATTCAAATAT
CACAGCTATTCTGAGAAATT

Downstream 100 bases:

>100_bases
ACACAGGAATTTTCCTGAAATGAGATTTCCTTTTGAGATTATAAGTCATTTTTTTGAATACAAAACAGCATCAGGTTTTG
ACCCCGTTTTTTACATTTAT

Product: cobalt-zinc-cadmium resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTETDGTANEVIFLSGESEDSRYSQAVHVTKVSVVSNILLTFFKFFAGIVGNSSAMIADAVHSTSDFMTDIAVIAGLKVA
RKPGDSTHNYGHGKIETLSAAFIGLVLIAVAFGIFWGGLEKVIAFYHGEMLPAPSGIALSAAVLSIVTKEWLFRYTIVYA
RGLRSDALTANAWHHRSDALSSIGTMIGIGGAVLLGGRWAVLDPIAAVILSFFVFRVAVEISYKNLNELLEASLDSTTYK
SIEEILISTEGVLGFHELKTRKIGNAMAADVHIEVDRNLNIVDAHEISVKVEDRLKEVCGKNGYFSIHVEPCPEHEPGYG
RKN

Sequences:

>Translated_323_residues
MTETDGTANEVIFLSGESEDSRYSQAVHVTKVSVVSNILLTFFKFFAGIVGNSSAMIADAVHSTSDFMTDIAVIAGLKVA
RKPGDSTHNYGHGKIETLSAAFIGLVLIAVAFGIFWGGLEKVIAFYHGEMLPAPSGIALSAAVLSIVTKEWLFRYTIVYA
RGLRSDALTANAWHHRSDALSSIGTMIGIGGAVLLGGRWAVLDPIAAVILSFFVFRVAVEISYKNLNELLEASLDSTTYK
SIEEILISTEGVLGFHELKTRKIGNAMAADVHIEVDRNLNIVDAHEISVKVEDRLKEVCGKNGYFSIHVEPCPEHEPGYG
RKN
>Mature_322_residues
TETDGTANEVIFLSGESEDSRYSQAVHVTKVSVVSNILLTFFKFFAGIVGNSSAMIADAVHSTSDFMTDIAVIAGLKVAR
KPGDSTHNYGHGKIETLSAAFIGLVLIAVAFGIFWGGLEKVIAFYHGEMLPAPSGIALSAAVLSIVTKEWLFRYTIVYAR
GLRSDALTANAWHHRSDALSSIGTMIGIGGAVLLGGRWAVLDPIAAVILSFFVFRVAVEISYKNLNELLEASLDSTTYKS
IEEILISTEGVLGFHELKTRKIGNAMAADVHIEVDRNLNIVDAHEISVKVEDRLKEVCGKNGYFSIHVEPCPEHEPGYGR
KN

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=278, Percent_Identity=25.1798561151079, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323831, Length=266, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325032, Length=263, Percent_Identity=26.615969581749, Blast_Score=97, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 34975; Mature: 34844

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETDGTANEVIFLSGESEDSRYSQAVHVTKVSVVSNILLTFFKFFAGIVGNSSAMIADA
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VHSTSDFMTDIAVIAGLKVARKPGDSTHNYGHGKIETLSAAFIGLVLIAVAFGIFWGGLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIAFYHGEMLPAPSGIALSAAVLSIVTKEWLFRYTIVYARGLRSDALTANAWHHRSDAL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
SSIGTMIGIGGAVLLGGRWAVLDPIAAVILSFFVFRVAVEISYKNLNELLEASLDSTTYK
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SIEEILISTEGVLGFHELKTRKIGNAMAADVHIEVDRNLNIVDAHEISVKVEDRLKEVCG
HHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCEEEHHEEEEEHHHHHHHHHC
KNGYFSIHVEPCPEHEPGYGRKN
CCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TETDGTANEVIFLSGESEDSRYSQAVHVTKVSVVSNILLTFFKFFAGIVGNSSAMIADA
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VHSTSDFMTDIAVIAGLKVARKPGDSTHNYGHGKIETLSAAFIGLVLIAVAFGIFWGGLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIAFYHGEMLPAPSGIALSAAVLSIVTKEWLFRYTIVYARGLRSDALTANAWHHRSDAL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
SSIGTMIGIGGAVLLGGRWAVLDPIAAVILSFFVFRVAVEISYKNLNELLEASLDSTTYK
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SIEEILISTEGVLGFHELKTRKIGNAMAADVHIEVDRNLNIVDAHEISVKVEDRLKEVCG
HHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCEEEHHEEEEEHHHHHHHHHC
KNGYFSIHVEPCPEHEPGYGRKN
CCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]