| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227865
Identifier: 21227865
GI number: 21227865
Start: 2102912
End: 2103694
Strand: Direct
Name: 21227865
Synonym: MM_1763
Alternate gene names: NA
Gene position: 2102912-2103694 (Clockwise)
Preceding gene: 21227864
Following gene: 21227866
Centisome position: 51.34
GC content: 49.43
Gene sequence:
>783_bases ATGAATGCTTCAAACGAACCTGTTATCCTTAAACTCGGAGGCAGCGCCATTACAGACAAAGGCGCGTATGAAGGGGTTGT AAAAGAGGCTGACCTTCTCAGGATTGCGCAGGAAGTTTCAGGCTTCAGGGGAAAAATGATTGTGGTCCACGGAGCCGGGT CTTTCGGGCACACCTATGCCAAAAAATACGGGCTTGACAGGACATTTGATCCCGAAGGGGCGATCGTAACCCATGAATCC GTGAAAAAACTCGCTTCAAAAGTAGTGGGTGCCCTGAACAGTTTCGGAGTCAGGGCTATTGCCGTGCACCCAATGGACTG TGCCGTGTGCAGAAACGGGAGGATAGAGACCATGTACCTTGACAGCATAAAACTCATGCTCGAAAAGGGCCTTGTCCCTG TACTTCATGGGGATGTTGCTATGGACATAGAACTGGGGACCTGCATCCTTTCCGGGGACCAGATTGTTCCCTATCTGGCA AAGGAACTCGGGATTTCCAGGCTCGGCCTGGGTTCGGCTGAGGACGGAGTGCTTGATATGGAAGGAAAACCGGTGCCTGA AATAACTCCCGAAACGTTTGAGGAATTTAGACACTGCATCGGAGGTTCGGGAAGTACTGATGTTACAGGCGGGATGCTTG GGAAGGTTCTGGAACTCCTTGAACTCAGCAAAAATTCTAGTATCACCTCCTATATATTCAATGCAGGAAAAGCGGATAAT ATTTACAGGTTCTTGAATGGGGAATCCATAGGGACCAGGATCAGTCCGGATAAAAGGGTATGA
Upstream 100 bases:
>100_bases AAGATTGCTTTTATTCCCATCTTTTCATCATTATTGTTGCAGAAATCATGATATCTGAATATAATTGAGAGTTATTTATA AAAAGGTGTCAAGTGATAAT
Downstream 100 bases:
>100_bases AGCATGATTAACACCACCTCCAGGCGAAAGATAGAACACCTTAAGCTCTGCGCTGAAAGCCCGGTTGAGGCCAGGCAGGT CAGTGCTGGCTTTGAAGATG
Product: kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNASNEPVILKLGGSAITDKGAYEGVVKEADLLRIAQEVSGFRGKMIVVHGAGSFGHTYAKKYGLDRTFDPEGAIVTHES VKKLASKVVGALNSFGVRAIAVHPMDCAVCRNGRIETMYLDSIKLMLEKGLVPVLHGDVAMDIELGTCILSGDQIVPYLA KELGISRLGLGSAEDGVLDMEGKPVPEITPETFEEFRHCIGGSGSTDVTGGMLGKVLELLELSKNSSITSYIFNAGKADN IYRFLNGESIGTRISPDKRV
Sequences:
>Translated_260_residues MNASNEPVILKLGGSAITDKGAYEGVVKEADLLRIAQEVSGFRGKMIVVHGAGSFGHTYAKKYGLDRTFDPEGAIVTHES VKKLASKVVGALNSFGVRAIAVHPMDCAVCRNGRIETMYLDSIKLMLEKGLVPVLHGDVAMDIELGTCILSGDQIVPYLA KELGISRLGLGSAEDGVLDMEGKPVPEITPETFEEFRHCIGGSGSTDVTGGMLGKVLELLELSKNSSITSYIFNAGKADN IYRFLNGESIGTRISPDKRV >Mature_260_residues MNASNEPVILKLGGSAITDKGAYEGVVKEADLLRIAQEVSGFRGKMIVVHGAGSFGHTYAKKYGLDRTFDPEGAIVTHES VKKLASKVVGALNSFGVRAIAVHPMDCAVCRNGRIETMYLDSIKLMLEKGLVPVLHGDVAMDIELGTCILSGDQIVPYLA KELGISRLGLGSAEDGVLDMEGKPVPEITPETFEEFRHCIGGSGSTDVTGGMLGKVLELLELSKNSSITSYIFNAGKADN IYRFLNGESIGTRISPDKRV
Specific function: Unknown
COG id: COG1608
COG function: function code R; Predicted archaeal kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: NA
Molecular weight: Translated: 27760; Mature: 27760
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASNEPVILKLGGSAITDKGAYEGVVKEADLLRIAQEVSGFRGKMIVVHGAGSFGHTYA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH KKYGLDRTFDPEGAIVTHESVKKLASKVVGALNSFGVRAIAVHPMDCAVCRNGRIETMYL HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCEEEEEH DSIKLMLEKGLVPVLHGDVAMDIELGTCILSGDQIVPYLAKELGISRLGLGSAEDGVLDM HHHHHHHHHCCCEEEECCEEEEEEECEEEECCCCHHHHHHHHCCCHHCCCCCCCCCEEEC EGKPVPEITPETFEEFRHCIGGSGSTDVTGGMLGKVLELLELSKNSSITSYIFNAGKADN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC IYRFLNGESIGTRISPDKRV EEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNASNEPVILKLGGSAITDKGAYEGVVKEADLLRIAQEVSGFRGKMIVVHGAGSFGHTYA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH KKYGLDRTFDPEGAIVTHESVKKLASKVVGALNSFGVRAIAVHPMDCAVCRNGRIETMYL HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCEEEEEH DSIKLMLEKGLVPVLHGDVAMDIELGTCILSGDQIVPYLAKELGISRLGLGSAEDGVLDM HHHHHHHHHCCCEEEECCEEEEEEECEEEECCCCHHHHHHHHCCCHHCCCCCCCCCEEEC EGKPVPEITPETFEEFRHCIGGSGSTDVTGGMLGKVLELLELSKNSSITSYIFNAGKADN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC IYRFLNGESIGTRISPDKRV EEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]