| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hemA [H]
Identifier: 21227843
GI number: 21227843
Start: 2081770
End: 2083116
Strand: Direct
Name: hemA [H]
Synonym: MM_1741
Alternate gene names: 21227843
Gene position: 2081770-2083116 (Clockwise)
Preceding gene: 21227842
Following gene: 21227844
Centisome position: 50.82
GC content: 46.03
Gene sequence:
>1347_bases GTGACAGAAATCTCAAGTATGGTTATATCCCATAAAAAAGCAAAAGTTGAGGAAATGGAGTCCGCCTGGCACGGAGACCT GGACGGTCTGCTCCGTAACCTTTACAAGCATGAGTATGTGTATGAGTGCGTCGTTTTAAAAACCTGCAACCGTGTTGAAA TCTACGTTGTTTCCCCCAAGAGCAGCAGTGTACTTTTCTCTTTTGCAAAAGAAATGGGAGCTTCCACCCATATTATTGAC TTTTACGGGCATGACGAGTCCCTGGAACACCTGCTGAGGCTTGCAGGAGGCCTCGAATCCATGATTGTGGGGGAAGACCA GATCCTCGGGCAGATTAAGGACCTCTACGCTTATTCGAAGAAAGCCGGGACAACCGGTAAAATCCTTGAAACGGCATTTG AAAAAGCCATTCAGGTAGGAAAAAGGATAAGGAATGAGACCCGGATCAATAAAGGTTCGGTCTCCATAGGCTCTGCTGCC GTGGACCTTGCTGAAGATATCTTCGGGGGGCTTACAGGAAAAAACGTGCTTGTTATTGGGGCAGGAGAGATTGGAGTCCT TGTCGCAAAAGCCCTTGCCGAAAAGGATATTGAGGCTATCTATATTGCAAACCGCACTTATAAGAAAGCTGAAGAAATCG CCTACGAACTCGGTGGGCACGCGGTCAGGCTTGATGATATCAGGGATTACCTACCTGGTGCTGATGTAGTTATAAGCGGT ACGGGAGCTCCTCATTATATCCTTACGCGGGAAATTGTTGAAGAAGCCATAAAGTGCAGGGAAAGGAAACTCCTTCTTAT CGATATCGCAAATCCCAGGGACATTGAGGAATCCGTTGTGGAGCTTGAAAATGTCGAACTCTGCAATATCGACAACCTTA GAGTCATAAGTGAAAGGACTCTCAGGATGAGGAAAGAAGAAGCAAAAAAAGCCGAAGCCATCATTCAGGAAGAGATCCGG CTTTTAAACCTCCAGTACAAACGCCAGAAAGCCGACAGGTTGATTTCCGAGCTTTACAAGCAGGTATATGATGTCCGGCT AAGAGAGAGGCAAAAAGCTGTCAACCGTTTAAGTTCCTATCATACCATCGGGGATATAGAAACCGAGGTTCTTGACGACC TGACCCGTTCTATTGTTAACAAGATCCTGGGAGAACCTACCAAAGTCCTCCGCCAGGCTGCAGAACTCGGGAACGAAGAG TTTCTTGATGTGGTTTCAAGGGTCTTCTGCCTCGACAAGGAGAAGGTGAGATTTGAAAAAATAAAACAGGCAAAGTTTGA CCAGATAAAACCCGGCTGTACAAAAGAACAGGCAGAGGTCAAAGAAGAATATGCTGTAAAAGATTAA
Upstream 100 bases:
>100_bases CTTTAGTGAAAAACGGCTGAGGATTTCCGGACAAAGTTTAATTTATAATTCCTTATATTATTCATTCTATTCCCTTATTC ATTCTATCCGGAGGCTCTCT
Downstream 100 bases:
>100_bases ACTCGGGGTACAGGAAAATAAAAAACGGAATAATTCAAGGGTTGAAACAAAAATACTAATCCAGTTCACAGTAATAAATA ATCAAATAAATTTACAGATA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTEISSMVISHKKAKVEEMESAWHGDLDGLLRNLYKHEYVYECVVLKTCNRVEIYVVSPKSSSVLFSFAKEMGASTHIID FYGHDESLEHLLRLAGGLESMIVGEDQILGQIKDLYAYSKKAGTTGKILETAFEKAIQVGKRIRNETRINKGSVSIGSAA VDLAEDIFGGLTGKNVLVIGAGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLPGADVVISG TGAPHYILTREIVEEAIKCRERKLLLIDIANPRDIEESVVELENVELCNIDNLRVISERTLRMRKEEAKKAEAIIQEEIR LLNLQYKRQKADRLISELYKQVYDVRLRERQKAVNRLSSYHTIGDIETEVLDDLTRSIVNKILGEPTKVLRQAAELGNEE FLDVVSRVFCLDKEKVRFEKIKQAKFDQIKPGCTKEQAEVKEEYAVKD
Sequences:
>Translated_448_residues MTEISSMVISHKKAKVEEMESAWHGDLDGLLRNLYKHEYVYECVVLKTCNRVEIYVVSPKSSSVLFSFAKEMGASTHIID FYGHDESLEHLLRLAGGLESMIVGEDQILGQIKDLYAYSKKAGTTGKILETAFEKAIQVGKRIRNETRINKGSVSIGSAA VDLAEDIFGGLTGKNVLVIGAGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLPGADVVISG TGAPHYILTREIVEEAIKCRERKLLLIDIANPRDIEESVVELENVELCNIDNLRVISERTLRMRKEEAKKAEAIIQEEIR LLNLQYKRQKADRLISELYKQVYDVRLRERQKAVNRLSSYHTIGDIETEVLDDLTRSIVNKILGEPTKVLRQAAELGNEE FLDVVSRVFCLDKEKVRFEKIKQAKFDQIKPGCTKEQAEVKEEYAVKD >Mature_447_residues TEISSMVISHKKAKVEEMESAWHGDLDGLLRNLYKHEYVYECVVLKTCNRVEIYVVSPKSSSVLFSFAKEMGASTHIIDF YGHDESLEHLLRLAGGLESMIVGEDQILGQIKDLYAYSKKAGTTGKILETAFEKAIQVGKRIRNETRINKGSVSIGSAAV DLAEDIFGGLTGKNVLVIGAGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLPGADVVISGT GAPHYILTREIVEEAIKCRERKLLLIDIANPRDIEESVVELENVELCNIDNLRVISERTLRMRKEEAKKAEAIIQEEIRL LNLQYKRQKADRLISELYKQVYDVRLRERQKAVNRLSSYHTIGDIETEVLDDLTRSIVNKILGEPTKVLRQAAELGNEEF LDVVSRVFCLDKEKVRFEKIKQAKFDQIKPGCTKEQAEVKEEYAVKD
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=409, Percent_Identity=35.9413202933985, Blast_Score=211, Evalue=8e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 50563; Mature: 50432
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISSMVISHKKAKVEEMESAWHGDLDGLLRNLYKHEYVYECVVLKTCNRVEIYVVSPK CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC SSSVLFSFAKEMGASTHIIDFYGHDESLEHLLRLAGGLESMIVGEDQILGQIKDLYAYSK CCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHH KAGTTGKILETAFEKAIQVGKRIRNETRINKGSVSIGSAAVDLAEDIFGGLTGKNVLVIG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE AGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLPGADVVISG CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEC TGAPHYILTREIVEEAIKCRERKLLLIDIANPRDIEESVVELENVELCNIDNLRVISERT CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEECCCCCHHHHHHH LRMRKEEAKKAEAIIQEEIRLLNLQYKRQKADRLISELYKQVYDVRLRERQKAVNRLSSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTIGDIETEVLDDLTRSIVNKILGEPTKVLRQAAELGNEEFLDVVSRVFCLDKEKVRFEK CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH IKQAKFDQIKPGCTKEQAEVKEEYAVKD HHHHHHHCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TEISSMVISHKKAKVEEMESAWHGDLDGLLRNLYKHEYVYECVVLKTCNRVEIYVVSPK CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC SSSVLFSFAKEMGASTHIIDFYGHDESLEHLLRLAGGLESMIVGEDQILGQIKDLYAYSK CCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHH KAGTTGKILETAFEKAIQVGKRIRNETRINKGSVSIGSAAVDLAEDIFGGLTGKNVLVIG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE AGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLPGADVVISG CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEC TGAPHYILTREIVEEAIKCRERKLLLIDIANPRDIEESVVELENVELCNIDNLRVISERT CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEECCCCCHHHHHHH LRMRKEEAKKAEAIIQEEIRLLNLQYKRQKADRLISELYKQVYDVRLRERQKAVNRLSSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTIGDIETEVLDDLTRSIVNKILGEPTKVLRQAAELGNEEFLDVVSRVFCLDKEKVRFEK CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH IKQAKFDQIKPGCTKEQAEVKEEYAVKD HHHHHHHCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]