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The map label for this gene is nirJ [H]

Identifier: 21227828

GI number: 21227828

Start: 2069622

End: 2070689

Strand: Direct

Name: nirJ [H]

Synonym: MM_1726

Alternate gene names: 21227828

Gene position: 2069622-2070689 (Clockwise)

Preceding gene: 21227827

Following gene: 21227829

Centisome position: 50.52

GC content: 49.34

Gene sequence:

>1068_bases
ATGATTGCCATGACAAATGCACCAAGGCTTATTGCGTGGGAACTGACTGCAGGGTGCAACCTGAACTGCGTACACTGCAG
GGGAGCTTCTACTTCCTCGGTTCCGGCAGATGAACTTACAACGGATGAGGCTAAACATTTCATTGACGAAGTCGCAGGGC
TTGGAAAGCCAATTCTCATCCTGAGCGGAGGCGAGCCTCTAACCAGATCTGACGTCTTTGAAATTGCACGCTACGGCACG
GATGCAGGGCTTCGAGTCGTGCTTGCAACAAACGGCACACTTCTTACGCCTGAGATTGTGGAGAAATTAAAAAAGGCGGG
CGTCCAGCGGCTCAGTATCAGTATTGATGGAGCGACTGCAGAGACGCACGACAATTTCAGGGGCATGCCAGGCGCTTTTG
AAAGGACACTTGCAGGCATTGAAGTCCTCAGGAAAGCGGATTTTCCCTTCCAGATCAATACTACGGTCTCAAAACGCAAC
CTTGAAGAAATCCATAAGACCTTTGATCTTGCAAAAGAGCTTGGAGCTGTTGCATACCATGTCTTTTTCCTTGTGCCTAC
AGGCAGGGGAGAAGAATCTGATGAGGTTTCTCCCGCGGACTATGAGCGCATCCTGCACTGGTTCTATGAGATGCAAAAAA
AATCGGAAATCCAGTTAAAAGCAACCTGCGCCCCTCACTACTTCAGGATAATGCGCCAGCAGGCAAAAAAAGAAGGTATC
GAAATCTCGGTTAAAACCCACGGCTACGAAGCAATGACAAAAGGCTGCCTCGGAGGCACAGGTTTTTGCTTTGTATCGAG
CGTTGGTGAGGTCTACCCTTGCGGCTATCTGCCCGTACTTGCTGGCAAGCTCAGGGAACAGCCTTTCAGGGAGATCTGGG
AGAATTCCGAAGTCTTTGCAAAACTCAGGAATCCTGAGGAACTTAAAGGAAAATGTGGGATCTGCGAATACAAAAAGGTC
TGTGCCGGCTGCAGGGCAAGGGCTTATGCTGCTACGGGCGATTATCTTGAAGAAGAGCCTTACTGTATCTACAGGCCACG
AAAAAATGGTAGTGATCAGGATGATTGA

Upstream 100 bases:

>100_bases
ACCCCTATTCAGCCTTCGGGCTGTGGTTCTAACTTCCTGAGAATCGTTAATTTGTAAATCTCATTAAACTTTAACAGCCA
TAAATAAAAACAGCTAATTT

Downstream 100 bases:

>100_bases
CATTGAAAATTATAAAGATCGGCTCCAGAAAGAGGCTGCCGAATTTTCCTGTGATATGGATCCTTATGAGGGGGAAGTTC
CGGTAATAGAACTTGACGAG

Product: Heme biosynthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIAMTNAPRLIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILILSGGEPLTRSDVFEIARYGT
DAGLRVVLATNGTLLTPEIVEKLKKAGVQRLSISIDGATAETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRN
LEEIHKTFDLAKELGAVAYHVFFLVPTGRGEESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGI
EISVKTHGYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFAKLRNPEELKGKCGICEYKKV
CAGCRARAYAATGDYLEEEPYCIYRPRKNGSDQDD

Sequences:

>Translated_355_residues
MIAMTNAPRLIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILILSGGEPLTRSDVFEIARYGT
DAGLRVVLATNGTLLTPEIVEKLKKAGVQRLSISIDGATAETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRN
LEEIHKTFDLAKELGAVAYHVFFLVPTGRGEESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGI
EISVKTHGYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFAKLRNPEELKGKCGICEYKKV
CAGCRARAYAATGDYLEEEPYCIYRPRKNGSDQDD
>Mature_355_residues
MIAMTNAPRLIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILILSGGEPLTRSDVFEIARYGT
DAGLRVVLATNGTLLTPEIVEKLKKAGVQRLSISIDGATAETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRN
LEEIHKTFDLAKELGAVAYHVFFLVPTGRGEESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGI
EISVKTHGYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFAKLRNPEELKGKCGICEYKKV
CAGCRARAYAATGDYLEEEPYCIYRPRKNGSDQDD

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39379; Mature: 39379

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAMTNAPRLIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILI
CCEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEE
LSGGEPLTRSDVFEIARYGTDAGLRVVLATNGTLLTPEIVEKLKKAGVQRLSISIDGATA
EECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECHHHHHHHHHCCCEEEEEEECCCCC
ETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRNLEEIHKTFDLAKELGAVAYH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEE
VFFLVPTGRGEESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGI
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC
EISVKTHGYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFA
EEEEEECCHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCHHHH
KLRNPEELKGKCGICEYKKVCAGCRARAYAATGDYLEEEPYCIYRPRKNGSDQDD
CCCCCHHHCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MIAMTNAPRLIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILI
CCEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEE
LSGGEPLTRSDVFEIARYGTDAGLRVVLATNGTLLTPEIVEKLKKAGVQRLSISIDGATA
EECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECHHHHHHHHHCCCEEEEEEECCCCC
ETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRNLEEIHKTFDLAKELGAVAYH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEE
VFFLVPTGRGEESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGI
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC
EISVKTHGYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFA
EEEEEECCHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCHHHH
KLRNPEELKGKCGICEYKKVCAGCRARAYAATGDYLEEEPYCIYRPRKNGSDQDD
CCCCCHHHCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]