| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227827
Identifier: 21227827
GI number: 21227827
Start: 2068960
End: 2069208
Strand: Direct
Name: 21227827
Synonym: MM_1725
Alternate gene names: NA
Gene position: 2068960-2069208 (Clockwise)
Preceding gene: 21227826
Following gene: 21227828
Centisome position: 50.51
GC content: 38.15
Gene sequence:
>249_bases TTGGATTCAGATAATGAATCTGTATTCAAGGAATCATACAAACTGCGCCCAAACGAATCAGTCTCAAAAGCAAAACCGGC TAACTTGAGAAGCTCTTTTGAATTGAAGGAATATACCTTTAGAATTATATTAGATAACGGCGTTGCAGAGGAAAATACTT CAGTATCTCTGGACCGCTGGAGTACGGCGACTATAGATATATACTGGGATTATCAAGATCCGATAATGATAGGGGTAGTT ACGGTTTAA
Upstream 100 bases:
>100_bases TTATCATGTATTAATATTTCTTCTCGGTGGCCAGCTTTAGATAATTTTTTTTGAATTAACAAATCATGATGTAGGGACCC ATGAAATATCTGTCGAGATA
Downstream 100 bases:
>100_bases AAGACAGGGTTTTTATTGATCCAGAAGCTTACCATTAGTTAAATTTATATTTACGAATTATTGATTTTTTATTTGCCTGC AATCGAATTTATGTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDSDNESVFKESYKLRPNESVSKAKPANLRSSFELKEYTFRIILDNGVAEENTSVSLDRWSTATIDIYWDYQDPIMIGVV TV
Sequences:
>Translated_82_residues MDSDNESVFKESYKLRPNESVSKAKPANLRSSFELKEYTFRIILDNGVAEENTSVSLDRWSTATIDIYWDYQDPIMIGVV TV >Mature_82_residues MDSDNESVFKESYKLRPNESVSKAKPANLRSSFELKEYTFRIILDNGVAEENTSVSLDRWSTATIDIYWDYQDPIMIGVV TV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9426; Mature: 9426
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDNESVFKESYKLRPNESVSKAKPANLRSSFELKEYTFRIILDNGVAEENTSVSLDRW CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEECCC STATIDIYWDYQDPIMIGVVTV CEEEEEEEECCCCCEEEEEEEC >Mature Secondary Structure MDSDNESVFKESYKLRPNESVSKAKPANLRSSFELKEYTFRIILDNGVAEENTSVSLDRW CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEECCC STATIDIYWDYQDPIMIGVVTV CEEEEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA