| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227826
Identifier: 21227826
GI number: 21227826
Start: 2068242
End: 2068670
Strand: Direct
Name: 21227826
Synonym: MM_1724
Alternate gene names: NA
Gene position: 2068242-2068670 (Clockwise)
Preceding gene: 21227825
Following gene: 21227827
Centisome position: 50.49
GC content: 36.83
Gene sequence:
>429_bases GTGAGACAGAGTAAGGTATCTGTACATACTTTGCGCATAATAATTAATTTTTGGGAAGTTTTGGTGATAATAGGGGTAAA AAATCAATATCTTTTTTTGATTCTAGTCCTGTTTTCAGGGCCCGCATTTGCAGATACTTTCCATGCACCTGGTCAGAATG AAATTATAGAGGAAACGATTTACTGGGCAGAAATAGCCGTATATGATGTACCGTACTCTACTTGGCATAATAATTTGGAG GAAACAATCTCTCTGCTCTTAAAACTAAATGAAGAATCCCTTAAAAACTATACAAATCCTGAAAGTCCGATATATGATCC AAATGTACTAAAAGCGTATGGAAATGTTCCGGTAATTAAGAATACTTCCCAGCTGGACGAGTTCAGTTCAACCCTACAGG CTAAAGAGATAGTTCTATCTGCGAGGTAA
Upstream 100 bases:
>100_bases GTAGGATCAGGTATTAATCTGGCAAAGTACCGCACGGAAATTATAGATCGTGGTATAATTGACATGGGCCGGAATATTAT GTTAATGAAACTCCTTAACA
Downstream 100 bases:
>100_bases AACCATATCTTTATCCTGATGGCCCGATAGTTAACTGCGGTGCCGGCCCTATGCTCGGGTATTTTTTGATCAAACTCTAT GACTATGAAGGTTAAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR
Sequences:
>Translated_142_residues MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR >Mature_142_residues MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16244; Mature: 16244
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETI CCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH YWAEIAVYDVPYSTWHNNLEETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIK HHHHEEEEECCHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHCCCCCEEE NTSQLDEFSSTLQAKEIVLSAR CCHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETI CCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH YWAEIAVYDVPYSTWHNNLEETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIK HHHHEEEEECCHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHCCCCCEEE NTSQLDEFSSTLQAKEIVLSAR CCHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA