Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227819

Identifier: 21227819

GI number: 21227819

Start: 2061719

End: 2062897

Strand: Direct

Name: 21227819

Synonym: MM_1717

Alternate gene names: NA

Gene position: 2061719-2062897 (Clockwise)

Preceding gene: 21227817

Following gene: 21227820

Centisome position: 50.33

GC content: 37.49

Gene sequence:

>1179_bases
ATGAAGATTAGTTCCAAAAGATATTTACTGCTCATCTTGTTCCTGATAACCCTCTCCATTTTTATTTCAGGTTGCGCAGA
AGAGTCCGGTGCCGAAGAAGTTTCATCTAACACTCAACCCAGTGCTGAAGAAATTGTGTCTAGCATGCAGATGGGAATGG
ACAGTCTCGAAGACTATTCTTTTACTATGTATGTAAATTCAACTTCAAGGCAGCAGAATCCAGAAGTGCATGAAGTTATA
TGGAAAAAACCCGATTTAATGAAAATGACTATTTTAAGCCCGGATAAAGATACGGAAGTAATTATGGCATCTGACGGAGA
TTTCCAATGGATCTATAGTTCCGAATCCAGGACTGTTTTCAAAACGGAGATTTCTGATGATTTTAATGATTTGAAACTCT
TCGAGCCTGATGTTTACGCTGAGTTTTTAAATGGTATTATCCTTAATGGGAAGCTACCTTCCCTCCTCGGGACCGAAAAC
ATCGATGGGAAAAACGCATATGTACTTGAGCTTACCCCTTCCGAGAAAAACGAATCGCTCCAATGGAAATCAAAAATATG
GGTTGACAGAGAAAACTGGATGCTCCTCAGGTCTGAAATATACGACAACAAAGAGAATATTTATCTTGAGATAGAAATTC
GGGATATGAAGTTGAATACTGGAATTCCAGATTCTGAATTTGAATTTAAAGTTCCAGATGGCGCGCAGGTAAAAGTACTG
GGATCGGAAGACTTCAAAAATGAAACCGAAAAAATGACGCTTGAAGAAGCAAAACAGTTTATTGATTTTGAAATACTCAC
TCCTGAATATCTCCCGGAGGGCTATGAATTTAATTATTCAATGGTCTCTTCCAGTAAGGATACACCTTATTCAACTTTTG
TCCATAGTGGGTTTAGTATTTTTGCAGGGCAGCATTACGAAAAAATCACTCTCGTGTATACGAAAGGAAATAATGAAATA
CGTATCATCGAAGGTGTTTCTGAAAAAGGTTTACATGAAATTCAGAATTTTGAAAGTGAAGGAGAATATATTCAGGTAAA
TAACATGAACGGTACGATTTCTCCGATATTTGGTGGAAATATGAAAGCTCTAACCTGGGAAAATGAAGAGCTTGAAGTCA
CTATCGTCTCCTCTTTCGATAAGGCAGAACTGCTTAATATAGCAAAATCTTTTTCCTGA

Upstream 100 bases:

>100_bases
AGTGTAAATCTAAATTTTTACCTATTATTCAAAAATAAGCTGTGTTGGCTTCCTTAGAAGATAGAATTAATACAAAATGT
CTCTAAATTGGGGTAAATAA

Downstream 100 bases:

>100_bases
AGCTTAATGAGTTCTCAAAAAATGAATTGTCACATAAAATGCCTCCTGGAAAATAAACAGAAGTAAGTATGAAATGAAGA
AGAAATTTGTATTTGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKISSKRYLLLILFLITLSIFISGCAEESGAEEVSSNTQPSAEEIVSSMQMGMDSLEDYSFTMYVNSTSRQQNPEVHEVI
WKKPDLMKMTILSPDKDTEVIMASDGDFQWIYSSESRTVFKTEISDDFNDLKLFEPDVYAEFLNGIILNGKLPSLLGTEN
IDGKNAYVLELTPSEKNESLQWKSKIWVDRENWMLLRSEIYDNKENIYLEIEIRDMKLNTGIPDSEFEFKVPDGAQVKVL
GSEDFKNETEKMTLEEAKQFIDFEILTPEYLPEGYEFNYSMVSSSKDTPYSTFVHSGFSIFAGQHYEKITLVYTKGNNEI
RIIEGVSEKGLHEIQNFESEGEYIQVNNMNGTISPIFGGNMKALTWENEELEVTIVSSFDKAELLNIAKSFS

Sequences:

>Translated_392_residues
MKISSKRYLLLILFLITLSIFISGCAEESGAEEVSSNTQPSAEEIVSSMQMGMDSLEDYSFTMYVNSTSRQQNPEVHEVI
WKKPDLMKMTILSPDKDTEVIMASDGDFQWIYSSESRTVFKTEISDDFNDLKLFEPDVYAEFLNGIILNGKLPSLLGTEN
IDGKNAYVLELTPSEKNESLQWKSKIWVDRENWMLLRSEIYDNKENIYLEIEIRDMKLNTGIPDSEFEFKVPDGAQVKVL
GSEDFKNETEKMTLEEAKQFIDFEILTPEYLPEGYEFNYSMVSSSKDTPYSTFVHSGFSIFAGQHYEKITLVYTKGNNEI
RIIEGVSEKGLHEIQNFESEGEYIQVNNMNGTISPIFGGNMKALTWENEELEVTIVSSFDKAELLNIAKSFS
>Mature_392_residues
MKISSKRYLLLILFLITLSIFISGCAEESGAEEVSSNTQPSAEEIVSSMQMGMDSLEDYSFTMYVNSTSRQQNPEVHEVI
WKKPDLMKMTILSPDKDTEVIMASDGDFQWIYSSESRTVFKTEISDDFNDLKLFEPDVYAEFLNGIILNGKLPSLLGTEN
IDGKNAYVLELTPSEKNESLQWKSKIWVDRENWMLLRSEIYDNKENIYLEIEIRDMKLNTGIPDSEFEFKVPDGAQVKVL
GSEDFKNETEKMTLEEAKQFIDFEILTPEYLPEGYEFNYSMVSSSKDTPYSTFVHSGFSIFAGQHYEKITLVYTKGNNEI
RIIEGVSEKGLHEIQNFESEGEYIQVNNMNGTISPIFGGNMKALTWENEELEVTIVSSFDKAELLNIAKSFS

Specific function: Unknown

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 44808; Mature: 44808

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISSKRYLLLILFLITLSIFISGCAEESGAEEVSSNTQPSAEEIVSSMQMGMDSLEDYS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
FTMYVNSTSRQQNPEVHEVIWKKPDLMKMTILSPDKDTEVIMASDGDFQWIYSSESRTVF
EEEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEE
KTEISDDFNDLKLFEPDVYAEFLNGIILNGKLPSLLGTENIDGKNAYVLELTPSEKNESL
EEECCCCCCCCEEECCHHHHHHHCCEEECCCCCHHCCCCCCCCCCEEEEEECCCCCCCCE
QWKSKIWVDRENWMLLRSEIYDNKENIYLEIEIRDMKLNTGIPDSEFEFKVPDGAQVKVL
EEEEEEEEECCCCEEEEEHHCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCEEEEE
GSEDFKNETEKMTLEEAKQFIDFEILTPEYLPEGYEFNYSMVSSSKDTPYSTFVHSGFSI
CCCCCCCHHHHHHHHHHHHHHCEEEECHHHCCCCCEEEEEEECCCCCCCHHHHHHCCEEE
FAGQHYEKITLVYTKGNNEIRIIEGVSEKGLHEIQNFESEGEYIQVNNMNGTISPIFGGN
ECCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCEEEEECCCC
MKALTWENEELEVTIVSSFDKAELLNIAKSFS
EEEEEECCCEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MKISSKRYLLLILFLITLSIFISGCAEESGAEEVSSNTQPSAEEIVSSMQMGMDSLEDYS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
FTMYVNSTSRQQNPEVHEVIWKKPDLMKMTILSPDKDTEVIMASDGDFQWIYSSESRTVF
EEEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEE
KTEISDDFNDLKLFEPDVYAEFLNGIILNGKLPSLLGTENIDGKNAYVLELTPSEKNESL
EEECCCCCCCCEEECCHHHHHHHCCEEECCCCCHHCCCCCCCCCCEEEEEECCCCCCCCE
QWKSKIWVDRENWMLLRSEIYDNKENIYLEIEIRDMKLNTGIPDSEFEFKVPDGAQVKVL
EEEEEEEEECCCCEEEEEHHCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCEEEEE
GSEDFKNETEKMTLEEAKQFIDFEILTPEYLPEGYEFNYSMVSSSKDTPYSTFVHSGFSI
CCCCCCCHHHHHHHHHHHHHHCEEEECHHHCCCCCEEEEEEECCCCCCCHHHHHHCCEEE
FAGQHYEKITLVYTKGNNEIRIIEGVSEKGLHEIQNFESEGEYIQVNNMNGTISPIFGGN
ECCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCEEEEECCCC
MKALTWENEELEVTIVSSFDKAELLNIAKSFS
EEEEEECCCEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]