Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227820

Identifier: 21227820

GI number: 21227820

Start: 2063025

End: 2063699

Strand: Direct

Name: 21227820

Synonym: MM_1718

Alternate gene names: NA

Gene position: 2063025-2063699 (Clockwise)

Preceding gene: 21227819

Following gene: 21227821

Centisome position: 50.36

GC content: 38.22

Gene sequence:

>675_bases
ATGGCTATTGTACCAGCAGTAAGTGCACAGGCTGACATTTCTCAAAATAAAGAGCATGCTGATGCAATAGACATTTCGAA
CAAAAAATCAATTTCTAAGGAAGACCTCAAAAAAGTATCAGAAAATGTGAATGTATTGAAAGAAACCGATGACGAAAAAA
TAGTATCTTTCAAGAAACAAGATGGATCAATTGGATACACTATTTCATGGAAAGATGAAGAGAATCCTAACAGAGTAAAT
TTTGCTTTTGTAGATCAGAATGAATTGGTATCCAAAAAGCTCGTATCTGCTTCAAGTCTCAATGATAGTTCGGCAGCTGC
AGCAGCAATTTCTGTAGCTAGGACAAGTTTTTGGCATGGAAGTTATATCGAGCAGTATGGTGACACTTTAACAGGGGGAG
TGCACATTTACTTCAGCGAAAGAGATGCAAATTGGGTTGCAGATGTGGGAACAGGTGCAGCTGGAGCAATAGGTGCTATC
ATAGGTTCATTTTTTACACCTACTGCTTCAATAATACTTAGTGCTCTACTCGCTGTAGCAGTGCAAACTGTTTATTGGCA
GGAACAGAAGTCCGATGGCAGCTTAGATGTAAGAATACCTTACGCAAATATACCCTCAATGCTATTAACAGGTACGATTT
ACGTGAAAATTGGTAGTCATTGGTATTGGATTTAA

Upstream 100 bases:

>100_bases
TGTCACATAAAATGCCTCCTGGAAAATAAACAGAAGTAAGTATGAAATGAAGAAGAAATTTGTATTTGGTGCACTGCTTG
CTGCAATGCTGCTGACAAGC

Downstream 100 bases:

>100_bases
TTGAGTGTGGGCTGATTTTTTAATCAGCCAGTTTTTTATTAGGTGGTAACATGCAAAGACAACGTATATTAGGGATTTTA
ATTTCAATTTTTATGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MAIVPAVSAQADISQNKEHADAIDISNKKSISKEDLKKVSENVNVLKETDDEKIVSFKKQDGSIGYTISWKDEENPNRVN
FAFVDQNELVSKKLVSASSLNDSSAAAAAISVARTSFWHGSYIEQYGDTLTGGVHIYFSERDANWVADVGTGAAGAIGAI
IGSFFTPTASIILSALLAVAVQTVYWQEQKSDGSLDVRIPYANIPSMLLTGTIYVKIGSHWYWI

Sequences:

>Translated_224_residues
MAIVPAVSAQADISQNKEHADAIDISNKKSISKEDLKKVSENVNVLKETDDEKIVSFKKQDGSIGYTISWKDEENPNRVN
FAFVDQNELVSKKLVSASSLNDSSAAAAAISVARTSFWHGSYIEQYGDTLTGGVHIYFSERDANWVADVGTGAAGAIGAI
IGSFFTPTASIILSALLAVAVQTVYWQEQKSDGSLDVRIPYANIPSMLLTGTIYVKIGSHWYWI
>Mature_223_residues
AIVPAVSAQADISQNKEHADAIDISNKKSISKEDLKKVSENVNVLKETDDEKIVSFKKQDGSIGYTISWKDEENPNRVNF
AFVDQNELVSKKLVSASSLNDSSAAAAAISVARTSFWHGSYIEQYGDTLTGGVHIYFSERDANWVADVGTGAAGAIGAII
GSFFTPTASIILSALLAVAVQTVYWQEQKSDGSLDVRIPYANIPSMLLTGTIYVKIGSHWYWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24311; Mature: 24180

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVPAVSAQADISQNKEHADAIDISNKKSISKEDLKKVSENVNVLKETDDEKIVSFKKQ
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEECCCCHHHEEEECC
DGSIGYTISWKDEENPNRVNFAFVDQNELVSKKLVSASSLNDSSAAAAAISVARTSFWHG
CCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
SYIEQYGDTLTGGVHIYFSERDANWVADVGTGAAGAIGAIIGSFFTPTASIILSALLAVA
HHHHHHCCEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
VQTVYWQEQKSDGSLDVRIPYANIPSMLLTGTIYVKIGSHWYWI
HHHHHHHCCCCCCCEEEEECCCCCCHHHHEEEEEEEECCEEECC
>Mature Secondary Structure 
AIVPAVSAQADISQNKEHADAIDISNKKSISKEDLKKVSENVNVLKETDDEKIVSFKKQ
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEECCCCHHHEEEECC
DGSIGYTISWKDEENPNRVNFAFVDQNELVSKKLVSASSLNDSSAAAAAISVARTSFWHG
CCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
SYIEQYGDTLTGGVHIYFSERDANWVADVGTGAAGAIGAIIGSFFTPTASIILSALLAVA
HHHHHHCCEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
VQTVYWQEQKSDGSLDVRIPYANIPSMLLTGTIYVKIGSHWYWI
HHHHHHHCCCCCCCEEEEECCCCCCHHHHEEEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA