| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227818
Identifier: 21227818
GI number: 21227818
Start: 2059782
End: 2060597
Strand: Reverse
Name: 21227818
Synonym: MM_1716
Alternate gene names: NA
Gene position: 2060597-2059782 (Counterclockwise)
Preceding gene: 21227823
Following gene: 21227810
Centisome position: 50.3
GC content: 38.11
Gene sequence:
>816_bases ATGAATCATTTCGAAATTTATAAGAAGATGGATGATGACGTTCAGGCAATATACAGGTCAAGACTTCTAACAGAGATACT TCTATCATTAAACGAGGGCAGTAAAAAGCTTCCCCAACTGCGTGAAATTACCGGAAGCACGTCTCAGGCACTGATTCCGA AGCTCAGGAAACTCGAAGCAGATCATCTGATAGAAACAAAAGAACATGAGTATTTCCTGACGTCAGCAGGAAAAATTGTG GCTTCAGGAATAGCTGACTCTTTTGTAACATTTTGGACGATTAATAAGTTTAAGCATTTCTGGTTGAGACATTACCTCGA AGAAATTCCAATTCCTCTGTTAAAAGAAATCGGATGTCTTTATGAGTCTGAAATCCTCAAGAATCGAGGCATGGAGATCC TTAATATCTATAACAACCAGTTAAAAATGATTAAAGAAGCAGATCATATATACGGTATATCGTCCGTGGTAACCAAAGGA GATACCGATTCTATTTCTGAAAGGGTGAAAGAAGGAGTCCCTGTCGAGCTTATAGTTCCTCTTCACGTTGCAGAAGAATT GAAGCGATCACCTTATCTGAAAAAAATAGAAGCACTGAAAGATTATGAAAACTTCAAATTAATGGTCATGGATGAAGATA TTAAAGTTGGGCTCATTGTTACGGATAAACGCCTTTCTCTGAATCTGTACAAAAAAGAAGGTATTGAGTACGACATAAGC ACAGGCCTGTTCAGCTTTGACTCGAAGGCCATTGAATGGGGAGAGATGCTTTTCTGGTATTGTAAAGGGAAGGCAGATTT TATAAAATTTCAGTGA
Upstream 100 bases:
>100_bases GATAGCAACATACATGCCCCAAAAAAAGAAAAGAATATATTACGTCAAAACAATTTAATAAGAAAGTGAAGAAAAAAATC TGTAGATGCGGCAACAGGAA
Downstream 100 bases:
>100_bases TGTAGAAACTTGTTAGAGAAAAATCTGGACAAGCCTCTTCAAACAGTTCCTATCATTATCATTATTGGAGCCTCGTTATC CCAATCTATTACTATAATAG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ
Sequences:
>Translated_271_residues MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ >Mature_271_residues MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ
Specific function: Unknown
COG id: COG4742
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31480; Mature: 31480
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEA CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHHHHCCH DHLIETKEHEYFLTSAGKIVASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCL HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKGDTDSISERVKEGVPVELIVP HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC LHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS HHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEHHHCCCCEECC TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ CCEECCCCHHHHHHHEEEEEECCCCCEEECC >Mature Secondary Structure MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEA CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHHHHCCH DHLIETKEHEYFLTSAGKIVASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCL HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKGDTDSISERVKEGVPVELIVP HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC LHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS HHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEHHHCCCCEECC TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ CCEECCCCHHHHHHHEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA