Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227810

Identifier: 21227810

GI number: 21227810

Start: 2050835

End: 2051239

Strand: Reverse

Name: 21227810

Synonym: MM_1708

Alternate gene names: NA

Gene position: 2051239-2050835 (Counterclockwise)

Preceding gene: 21227818

Following gene: 21227809

Centisome position: 50.07

GC content: 43.21

Gene sequence:

>405_bases
GTGCACTGCCTTGAGTGCGGGCTTGTTTACATTGTCTCAGGGTTAAAAGTCCCTGAAAAAATAAGCGTAAGGGTCTTCGT
AAACAGGATAGAACATCCTTTCACGCACTGGGTAAAGTTGAACGCCGGAGAACTTCTGCGAGAAGATGAAGAAATAATTC
TGGATAAAGTGAAAACCGGTTACGGAAGCCCATTTGTTATAACTTCGCTTCAGATTGGAGTCAGAAGGGTGCCTTCTGCC
CTTGCCGAGGAACTCGATACAATCTGGGCAAGACCTCTGAATGAAATTACATTCGCAAAGAGAAGAAAAATAAGGCAAAA
ACACCCGATGTCCTTTGAAAATATTACATCCACAGCTGGAACTTCCACTGCTTCCGAATATTTGGAAGTAGTTGATGAAA
GCTGA

Upstream 100 bases:

>100_bases
GAGACCTGCCATGACATAGCATATCAAAATAGAATGCCCCTCATGCTCACCTGAGGAAAAAGTCCCGCATGAACTGATAA
AATTTGGGATAAGCCCACTG

Downstream 100 bases:

>100_bases
TTTTTAAACAGGCAACCACAGTTTATAGACTGCAATTTATGAACTACAATTTATGGACTACAATTTATAGAGATCTATTT
TTGCAAAACTCTGCTTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHCLECGLVYIVSGLKVPEKISVRVFVNRIEHPFTHWVKLNAGELLREDEEIILDKVKTGYGSPFVITSLQIGVRRVPSA
LAEELDTIWARPLNEITFAKRRKIRQKHPMSFENITSTAGTSTASEYLEVVDES

Sequences:

>Translated_134_residues
MHCLECGLVYIVSGLKVPEKISVRVFVNRIEHPFTHWVKLNAGELLREDEEIILDKVKTGYGSPFVITSLQIGVRRVPSA
LAEELDTIWARPLNEITFAKRRKIRQKHPMSFENITSTAGTSTASEYLEVVDES
>Mature_134_residues
MHCLECGLVYIVSGLKVPEKISVRVFVNRIEHPFTHWVKLNAGELLREDEEIILDKVKTGYGSPFVITSLQIGVRRVPSA
LAEELDTIWARPLNEITFAKRRKIRQKHPMSFENITSTAGTSTASEYLEVVDES

Specific function: Unknown

COG id: COG1326

COG function: function code R; Uncharacterized archaeal Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15197; Mature: 15197

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCLECGLVYIVSGLKVPEKISVRVFVNRIEHPFTHWVKLNAGELLREDEEIILDKVKTG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHHHHHHCC
YGSPFVITSLQIGVRRVPSALAEELDTIWARPLNEITFAKRRKIRQKHPMSFENITSTAG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC
TSTASEYLEVVDES
CHHHHHHHHHHCCC
>Mature Secondary Structure
MHCLECGLVYIVSGLKVPEKISVRVFVNRIEHPFTHWVKLNAGELLREDEEIILDKVKTG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHHHHHHCC
YGSPFVITSLQIGVRRVPSALAEELDTIWARPLNEITFAKRRKIRQKHPMSFENITSTAG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC
TSTASEYLEVVDES
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA