| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227807
Identifier: 21227807
GI number: 21227807
Start: 2048734
End: 2049198
Strand: Reverse
Name: 21227807
Synonym: MM_1705
Alternate gene names: NA
Gene position: 2049198-2048734 (Counterclockwise)
Preceding gene: 21227808
Following gene: 21227806
Centisome position: 50.03
GC content: 42.8
Gene sequence:
>465_bases ATGGACATCGATATATACGAGGATTTTGAAGAAATTCATGTAAAAGATGTCTATATAGTCGATGTGTTCAGTGACCCTAC CCCTGTTGTGCTTCTTGAGAACCTGAAAGGAGAAATGCTTCCTATATATATAGGTCATCTGGAAGCCCTTTCAATAGGGA ACGTACTTAAAAACATTTCTCCTCCTCGCCCCATGGCGCATGACCTTATGGTCAATATTTTCGATCGCCTGGACATAAAA ATTGAAGGCGTGTTAATTGACGATAAGGTGGATAAAGTATATTATGCCCGCCTTCTGGTAAAAAAAGATAACAGCATAAT GCAGTTTGATGCACGACCAAGCGACTGCATTGCACTTGCGCTCAGGGTGGGAGCCCCGATAAGAATACGGAAGAGAGTGC TGGAATGTTCAGAGATAGAGATGTCCAGACTTGAAGGCGCACGCGTGATAAACATTTTCGGCTAA
Upstream 100 bases:
>100_bases AACCGGAATTAAAAAGTATGAAATAAAACTCAAAGATTCTTCTTTAATAATCTGAAAAGAATTAATAAATTATTAATAAG TGTGAAATTAACTACTTGAT
Downstream 100 bases:
>100_bases GAGAATATCTTGACAAGGACACCTGGTTAAATCCGGTTTTTTTGCAGAAATCACGGCGGGTTCATCTTTGCCAAAAACCT TTATTCGATCCTGTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG
Sequences:
>Translated_154_residues MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG >Mature_154_residues MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 17553; Mature: 17553
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNIS CCCCHHCCHHHCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCC PPRPMAHDLMVNIFDRLDIKIEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALA CCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHEEEEEEEEECCCCEEEECCCCHHHHEEH LRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNIS CCCCHHCCHHHCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCC PPRPMAHDLMVNIFDRLDIKIEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALA CCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHEEEEEEEEECCCCEEEECCCCHHHHEEH LRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]