The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227807

Identifier: 21227807

GI number: 21227807

Start: 2048734

End: 2049198

Strand: Reverse

Name: 21227807

Synonym: MM_1705

Alternate gene names: NA

Gene position: 2049198-2048734 (Counterclockwise)

Preceding gene: 21227808

Following gene: 21227806

Centisome position: 50.03

GC content: 42.8

Gene sequence:

>465_bases
ATGGACATCGATATATACGAGGATTTTGAAGAAATTCATGTAAAAGATGTCTATATAGTCGATGTGTTCAGTGACCCTAC
CCCTGTTGTGCTTCTTGAGAACCTGAAAGGAGAAATGCTTCCTATATATATAGGTCATCTGGAAGCCCTTTCAATAGGGA
ACGTACTTAAAAACATTTCTCCTCCTCGCCCCATGGCGCATGACCTTATGGTCAATATTTTCGATCGCCTGGACATAAAA
ATTGAAGGCGTGTTAATTGACGATAAGGTGGATAAAGTATATTATGCCCGCCTTCTGGTAAAAAAAGATAACAGCATAAT
GCAGTTTGATGCACGACCAAGCGACTGCATTGCACTTGCGCTCAGGGTGGGAGCCCCGATAAGAATACGGAAGAGAGTGC
TGGAATGTTCAGAGATAGAGATGTCCAGACTTGAAGGCGCACGCGTGATAAACATTTTCGGCTAA

Upstream 100 bases:

>100_bases
AACCGGAATTAAAAAGTATGAAATAAAACTCAAAGATTCTTCTTTAATAATCTGAAAAGAATTAATAAATTATTAATAAG
TGTGAAATTAACTACTTGAT

Downstream 100 bases:

>100_bases
GAGAATATCTTGACAAGGACACCTGGTTAAATCCGGTTTTTTTGCAGAAATCACGGCGGGTTCATCTTTGCCAAAAACCT
TTATTCGATCCTGTTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK
IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG

Sequences:

>Translated_154_residues
MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK
IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG
>Mature_154_residues
MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNISPPRPMAHDLMVNIFDRLDIK
IEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALALRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 17553; Mature: 17553

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNIS
CCCCHHCCHHHCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCC
PPRPMAHDLMVNIFDRLDIKIEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALA
CCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHEEEEEEEEECCCCEEEECCCCHHHHEEH
LRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG
HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MDIDIYEDFEEIHVKDVYIVDVFSDPTPVVLLENLKGEMLPIYIGHLEALSIGNVLKNIS
CCCCHHCCHHHCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCC
PPRPMAHDLMVNIFDRLDIKIEGVLIDDKVDKVYYARLLVKKDNSIMQFDARPSDCIALA
CCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHEEEEEEEEECCCCEEEECCCCHHHHEEH
LRVGAPIRIRKRVLECSEIEMSRLEGARVINIFG
HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]