| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227797
Identifier: 21227797
GI number: 21227797
Start: 2037622
End: 2038263
Strand: Direct
Name: 21227797
Synonym: MM_1695
Alternate gene names: NA
Gene position: 2037622-2038263 (Clockwise)
Preceding gene: 21227796
Following gene: 21227798
Centisome position: 49.74
GC content: 42.52
Gene sequence:
>642_bases GTGAGAAAATTACTATTTACAATAATAATTATCAGTATATTAGCAATCAGTGTTACTGGCTGTACGGACACGGAAGATGC ATCATCCATTCCTGCTGATGAAGCAGAGCCCTCCGAGGAGGTATCTTCTGCAGATTCTGCAATCTCCCCTGAAAATGAAA CTGCTGCCAGCGAGGATGTTATTACTCTGGATAGGGCAAAGGAAATCGCACTTGCTCATGCCGGACTTGAAGAAACTGAT GTTACCTTTGTTAAATCATGGCTTGAAACCGATGACGGTAGACAGGAATATGAAATCGAGTTTTACCGTGGTAACACAGA ATATGATTATGATATCGACGCGCTTACTGGAGACATTGTAAGCTATGACTCTGATGCGGAAAACTATTCGAGATCCGATA GCGCACAGTCAGCCGGCAATAATACTTATATCGGGGAAGAAAAAGCAAAGTCCATAGCACTTGCAAAAGTTTCAGGAGCA ACGGAGTCTGATATCCGGCTTTATCTGGATTCTGAAGATGGAAAGCCAGTATATGAAGGTTCTATCCTTTTTAACAACAC AGAATACGAATTTGAAATTGACGCCGTCACCGGAACAGTTCTTCAGTGGAACTATGAACCTGCAGATGACGATGATCGCT GA
Upstream 100 bases:
>100_bases GACCTTGATGTTCAAGTCAGATCTAAATAGTAACACCTTTATATTTCTAAGACTAAAATTACCCTTAACACTAAATAAAA TCACATAAGAGGCATTTACT
Downstream 100 bases:
>100_bases AAACGAAAAATTTCCAGGTGGAGTTAACTATTTTTTTCGGGCTGAGAACTTTTTATAAAGTTCTCTTTATTCCCTGTTTT ATACACATGCTCTTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase Propeptide And YPEB Domain Protein; Lipoprotein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR
Sequences:
>Translated_213_residues MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR >Mature_213_residues MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR
Specific function: Unknown
COG id: COG3212
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23409; Mature: 23409
Theoretical pI: Translated: 3.65; Mature: 3.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDV CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCE ITLDRAKEIALAHAGLEETDVTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIV EEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCEE SYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGATESDIRLYLDSEDGKPVYEG ECCCCCHHCCCCCCHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEC SILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR EEEECCCCEEEEEEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDV CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCE ITLDRAKEIALAHAGLEETDVTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIV EEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCEE SYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGATESDIRLYLDSEDGKPVYEG ECCCCCHHCCCCCCHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEC SILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR EEEECCCCEEEEEEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA