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The map label for this gene is yhfW [H]

Identifier: 21227758

GI number: 21227758

Start: 1978129

End: 1979697

Strand: Reverse

Name: yhfW [H]

Synonym: MM_1656

Alternate gene names: 21227758

Gene position: 1979697-1978129 (Counterclockwise)

Preceding gene: 21227762

Following gene: 21227757

Centisome position: 48.33

GC content: 48.37

Gene sequence:

>1569_bases
ATGGAAAGCAAGAGGGAATACGATTATATCCTGCCCGGCAGGGCAGAATCATACTGGCTGGCAACTGTACCCGAGCCCAG
CTATCCTGCGCTTAAAGGGGACATCAGAGTTGATATTGCAATAATCGGAGGAGGAATAGCAGGGCTCACAACGGCTTACC
TGTTAAAAGAAGCAGGTTTTTCGTCCATTGCAGTGATTGAAGCGGGCCGAATCCTGAGAGGAGTTACCGGACACACCACA
GCCAAAGTTACATCTCAGCACAGCCTGATCTATGACCGCCTGCTCTCAAAATTTGGAAAAAGGCAGGCGCAGCAGTATGC
AGAGTCCAATCAGGCAGCCCTGGAAAAGATAGCTTCGATAGTGGCTTCAAAAAAGATAGACTGCGATTTTGTCCGCAAGC
CTTCATATGTCTATGCAGGGTCCGAAGACTCTACCAATAAAATCCAGAATGAAGCTCAGACAGCCCGGAACCTTGGGCTT
CCTGCTTCATTTGAAGAAAATCTTCCCTTGCCTTTTAAAACGTATGGAGCAGTCCGCTTTAATAATCAGGCACAGTTCCA
CCCTGTAAAATACCTCAACGCGCTGGCAGAGCAAATTCATGAGGGCGGATGCCACATCTTTGAAAATACAAGAGCATTGA
AAATAGAAGGGGAGGAGCCTGTAACAATAACAACGGATAAGGGGACCATACGCGCACACAAAGTTGTTCAGGCAATGCAT
TATCCGATCCACGACAGGCCAGGGCTGTTTTTCCAGCGCCTTTACCAGTCCCGCTCATATGTTCTTGGGGTAAGGATTAG
AGATCCTTTTCCTGATGGGATGTTCATAAACGCCGAAGAGCCAGTCCGTTCCCTGCGCTCGCAGAGTACGGATAAAGGAG
AACTTATTCTCGTGAGCGGAGAGGGCCACAGGACAGGTGAAGAAGAACACGAAATTTCTCGCTACCAGAATCTTGAGAAA
TGGGTAAGGTCCGTATATTCCGTAGATTCCATTGATTACCGCTGGTCCAGCCAGGATGCCATAAGCATTGACCATATTCC
CTATATTGGAAGGCAAACCTCAGGTAATGACAGCATATTTCTTGCAACAGGGTTCAAAAAATGGGGCATGACCATGGGCA
CGGTTGCAGCAATGATCATTAAAGACATGATCCGCGAGAAGTACAACCCCTGGGAAGAGGTGTATGACCCTTCACGGTTC
AAGCCTGTGGAATCGGCTAAAACCCTGCTCTCTCAGGCTGTGGAAGCCACCAAGGGCTTTGTGGGCGACAGGATACTGCC
CACTCATAAAGAAGCGTCTCAGATTGGCCCGGAGGAAGGTGCAATCGTCAAAATAGAGGGGGAAAGAGTGGCAGCGTACA
GAGACAGAAACGGGGTACTTTATACACTCAATCCCTCCTGCAGACACCTGGGATGTATCGTTTCCTGGAACGATGCGGAA
AAGACATGGGACTGTCCCTGTCATGGTTCTCGATATAAAGCAACTGGCGAGGTAATTCACAGCCCTGCTGTTTACGGGCT
TTCGGAAAAGAAAATCAGGGGACAGGACAAAAATAATATTCATACATAA

Upstream 100 bases:

>100_bases
CATTGACGAAGCCTGCTTTTAGACCTGGCTGAATTTAAATCCGACCGGTAAGAGCGTTCAGAGGAGTAGAAACCCGGGAA
AAATTATACTGGTGAAAAAT

Downstream 100 bases:

>100_bases
GAAACAATTCGTAATTCCTATTTTTATATGAATATGCCGAAATAATAGTTTATGCCACCAGAAAATAAAAATTCCGATCC
CTTTGAGGAATTAAAGTGGA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MESKREYDYILPGRAESYWLATVPEPSYPALKGDIRVDIAIIGGGIAGLTTAYLLKEAGFSSIAVIEAGRILRGVTGHTT
AKVTSQHSLIYDRLLSKFGKRQAQQYAESNQAALEKIASIVASKKIDCDFVRKPSYVYAGSEDSTNKIQNEAQTARNLGL
PASFEENLPLPFKTYGAVRFNNQAQFHPVKYLNALAEQIHEGGCHIFENTRALKIEGEEPVTITTDKGTIRAHKVVQAMH
YPIHDRPGLFFQRLYQSRSYVLGVRIRDPFPDGMFINAEEPVRSLRSQSTDKGELILVSGEGHRTGEEEHEISRYQNLEK
WVRSVYSVDSIDYRWSSQDAISIDHIPYIGRQTSGNDSIFLATGFKKWGMTMGTVAAMIIKDMIREKYNPWEEVYDPSRF
KPVESAKTLLSQAVEATKGFVGDRILPTHKEASQIGPEEGAIVKIEGERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAE
KTWDCPCHGSRYKATGEVIHSPAVYGLSEKKIRGQDKNNIHT

Sequences:

>Translated_522_residues
MESKREYDYILPGRAESYWLATVPEPSYPALKGDIRVDIAIIGGGIAGLTTAYLLKEAGFSSIAVIEAGRILRGVTGHTT
AKVTSQHSLIYDRLLSKFGKRQAQQYAESNQAALEKIASIVASKKIDCDFVRKPSYVYAGSEDSTNKIQNEAQTARNLGL
PASFEENLPLPFKTYGAVRFNNQAQFHPVKYLNALAEQIHEGGCHIFENTRALKIEGEEPVTITTDKGTIRAHKVVQAMH
YPIHDRPGLFFQRLYQSRSYVLGVRIRDPFPDGMFINAEEPVRSLRSQSTDKGELILVSGEGHRTGEEEHEISRYQNLEK
WVRSVYSVDSIDYRWSSQDAISIDHIPYIGRQTSGNDSIFLATGFKKWGMTMGTVAAMIIKDMIREKYNPWEEVYDPSRF
KPVESAKTLLSQAVEATKGFVGDRILPTHKEASQIGPEEGAIVKIEGERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAE
KTWDCPCHGSRYKATGEVIHSPAVYGLSEKKIRGQDKNNIHT
>Mature_522_residues
MESKREYDYILPGRAESYWLATVPEPSYPALKGDIRVDIAIIGGGIAGLTTAYLLKEAGFSSIAVIEAGRILRGVTGHTT
AKVTSQHSLIYDRLLSKFGKRQAQQYAESNQAALEKIASIVASKKIDCDFVRKPSYVYAGSEDSTNKIQNEAQTARNLGL
PASFEENLPLPFKTYGAVRFNNQAQFHPVKYLNALAEQIHEGGCHIFENTRALKIEGEEPVTITTDKGTIRAHKVVQAMH
YPIHDRPGLFFQRLYQSRSYVLGVRIRDPFPDGMFINAEEPVRSLRSQSTDKGELILVSGEGHRTGEEEHEISRYQNLEK
WVRSVYSVDSIDYRWSSQDAISIDHIPYIGRQTSGNDSIFLATGFKKWGMTMGTVAAMIIKDMIREKYNPWEEVYDPSRF
KPVESAKTLLSQAVEATKGFVGDRILPTHKEASQIGPEEGAIVKIEGERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAE
KTWDCPCHGSRYKATGEVIHSPAVYGLSEKKIRGQDKNNIHT

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=395, Percent_Identity=20.7594936708861, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 58453; Mature: 58453

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKREYDYILPGRAESYWLATVPEPSYPALKGDIRVDIAIIGGGIAGLTTAYLLKEAGF
CCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCC
SSIAVIEAGRILRGVTGHTTAKVTSQHSLIYDRLLSKFGKRQAQQYAESNQAALEKIASI
CEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VASKKIDCDFVRKPSYVYAGSEDSTNKIQNEAQTARNLGLPASFEENLPLPFKTYGAVRF
HHHCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEE
NNQAQFHPVKYLNALAEQIHEGGCHIFENTRALKIEGEEPVTITTDKGTIRAHKVVQAMH
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCEEEECCCCCHHHHHHHHHHH
YPIHDRPGLFFQRLYQSRSYVLGVRIRDPFPDGMFINAEEPVRSLRSQSTDKGELILVSG
CCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCCCCEEEEEC
EGHRTGEEEHEISRYQNLEKWVRSVYSVDSIDYRWSSQDAISIDHIPYIGRQTSGNDSIF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCCCCCCCCCCCEEE
LATGFKKWGMTMGTVAAMIIKDMIREKYNPWEEVYDPSRFKPVESAKTLLSQAVEATKGF
EEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
VGDRILPTHKEASQIGPEEGAIVKIEGERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAE
CCCCCCCCCCHHHHCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCEEEEEEEECCCC
KTWDCPCHGSRYKATGEVIHSPAVYGLSEKKIRGQDKNNIHT
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MESKREYDYILPGRAESYWLATVPEPSYPALKGDIRVDIAIIGGGIAGLTTAYLLKEAGF
CCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCC
SSIAVIEAGRILRGVTGHTTAKVTSQHSLIYDRLLSKFGKRQAQQYAESNQAALEKIASI
CEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VASKKIDCDFVRKPSYVYAGSEDSTNKIQNEAQTARNLGLPASFEENLPLPFKTYGAVRF
HHHCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEE
NNQAQFHPVKYLNALAEQIHEGGCHIFENTRALKIEGEEPVTITTDKGTIRAHKVVQAMH
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCEEEECCCCCHHHHHHHHHHH
YPIHDRPGLFFQRLYQSRSYVLGVRIRDPFPDGMFINAEEPVRSLRSQSTDKGELILVSG
CCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCCCCEEEEEC
EGHRTGEEEHEISRYQNLEKWVRSVYSVDSIDYRWSSQDAISIDHIPYIGRQTSGNDSIF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCCCCCCCCCCCEEE
LATGFKKWGMTMGTVAAMIIKDMIREKYNPWEEVYDPSRFKPVESAKTLLSQAVEATKGF
EEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
VGDRILPTHKEASQIGPEEGAIVKIEGERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAE
CCCCCCCCCCHHHHCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCEEEEEEEECCCC
KTWDCPCHGSRYKATGEVIHSPAVYGLSEKKIRGQDKNNIHT
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]