Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227757

Identifier: 21227757

GI number: 21227757

Start: 1976155

End: 1978077

Strand: Reverse

Name: 21227757

Synonym: MM_1655

Alternate gene names: NA

Gene position: 1978077-1976155 (Counterclockwise)

Preceding gene: 21227758

Following gene: 21227756

Centisome position: 48.29

GC content: 44.41

Gene sequence:

>1923_bases
ATGCCACCAGAAAATAAAAATTCCGATCCCTTTGAGGAATTAAAGTGGAGTGACCTGCAGGACTGGGCAGGAGGGAAGGC
AACTGCAAAGGGGATAAAGTACCAGGAAGAAGAGAGGGTTAAAGAGATAAAGCGAACCCCTGAAGGCAGCCTTGTAGCCC
TGGTAGAAGGGACATCTGATTATTTTACGGAAATTTTCCTGAAAGACGGGAAATTGAGTTCGGTCTGTACCTGTCCTGTG
GGGCACGACTGCAAACATGGGGTTGCAGCGGTACTTGAATACCTTGAACTTGCAGAGCAGGGAGAAGAGGTTCTGATTGC
TTCCGAAGAAGACCCTTTCGTTGCAAGAGCCAGACAGGAATATACCGGAGATGAAATCTCTGCCCTCGGAGAAGAAGAGT
CATCAGCCAGGGCTCTCCGTGAGTACCTGCAGCGTCTGACCAGGACGGAATTGATCGAAATACTGGTGACATTTGCAGAA
AAGGATACCGGGCTTGGAAAGTATCTCAAAGAAAGGCAAACTCTCTCAGCAGAAAACGTGGAAGAAATTGTAGGGGAAGT
CTACTCCGAACTTGACGAGCTTCTGGAAGAAGCCGGAGATTTTGAGTATGCGGATTATGAAATGGATGTCCCTGATTTTT
TAGACGTGCAGGTAGGGCTGGAAAGCCTGCTCGATTCGGGACACCCTGATGAACTTCTTGATATCGGAAAAGAGCTGATG
GACAGATACGAAAAAATTGCGGATTATGATGAAGAAGGGGAGATAGGAACAAAAATATCATTTTGCATGGACGTGGTTTT
TAAAGCTCTGACCCGTTCTTCAATTCCTGCTCACGAAAAAATGCTTTATATGCTTGAAATTGAACTCAGAGACAATTACA
ATATTCTTAATGAACACGGTTTCTGGGAAAAAGACTTTACTCCCGAAGAATGGAGGCGTTTTTCAGAATCCCTTAAGATC
AAGCTAAAAGAAGCTGAAAAGACAGAAAATCCCCTTTATGACTCCCTCTGGCAGAGAGACTATGCTGTTGACAGGCTGGT
TTATGCTCTTGAAAAATCCGGGCTCTTTGAGGAGGTAATCCCGTTATGTGAAAAAGAAGCCAAAAAAACAGGAAATTACA
TCCGGCTGGTAAGGGTGCTGCTTGACTCAGGGAAGAGAGAGAAAGCAGAAGAATGGATCTACAGGGGGATTAAAGAGACC
AGAGAACATGAAACTGAGACTGCCCATCAGCTCTTGCAGATCCTTCTTGAGATTAAAGAAGGGGAAGGAGACTGGCTTTT
TGTGTCTGCCCTTGAAACAGAAGAGTTTTTCAGGCATCCAGACATATCCAGCTATTCTAGCATGCAGGAAGGAGCAAAGA
AGGCGGGAAAATGGGAAGAAGTCCGGGAGGCTGCCATCAGGTACCTGAAAAATGGAAAACTCCCAGCCAGTAAGGGTAAA
AATAAAGAAAAAGCTTCGATCCTTCCCGGGGTTCTACCGAAAACAGGGCTTCTGGAGAAGGAGTTATTAAAAAAGATCAA
AACTCCTGTATTTGACCTGCTGATAAAGATAGCAATTCAGGAAGAGGACCCACAGGAAGTTATCCACTGGTATGAGGAGC
TTAAAAAAAGCGGAGAAGAATCCCAGGGATACTGGCATTCAATCTCCGAAAGCGAAATTGCAAATTCGGTGAAGGAAAAG
TATCCTGAAGTTGCGCTTGAAATATGGAAAAGCCTTGCAGAAAAGCTGATTTCGGAAGCAAAAGTGGGCTCGTATGAAGA
GGCGTCCGCATACATTAGAAAAATAAAAGAAACATTCGAAGCCAGCGGAAAAAAAGAAGAATGGGAGAATTATCTCTCTG
AGATAAAGGAGGCAAACAGCCGTAAAAAGAAGCTTCTTGGGATTCTGGATACACTTGGAGAAGACAGGATCATAAAGGTA
TAA

Upstream 100 bases:

>100_bases
TTCGGAAAAGAAAATCAGGGGACAGGACAAAAATAATATTCATACATAAGAAACAATTCGTAATTCCTATTTTTATATGA
ATATGCCGAAATAATAGTTT

Downstream 100 bases:

>100_bases
ATAATAAGAGGAGAAGCATCAGCATCTCCTCTTTAAAGTCAGGAATACACAGGTAAGCAGCACCATAAACAGGTAAGCAG
CACCAATGAAAATCTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MPPENKNSDPFEELKWSDLQDWAGGKATAKGIKYQEEERVKEIKRTPEGSLVALVEGTSDYFTEIFLKDGKLSSVCTCPV
GHDCKHGVAAVLEYLELAEQGEEVLIASEEDPFVARARQEYTGDEISALGEEESSARALREYLQRLTRTELIEILVTFAE
KDTGLGKYLKERQTLSAENVEEIVGEVYSELDELLEEAGDFEYADYEMDVPDFLDVQVGLESLLDSGHPDELLDIGKELM
DRYEKIADYDEEGEIGTKISFCMDVVFKALTRSSIPAHEKMLYMLEIELRDNYNILNEHGFWEKDFTPEEWRRFSESLKI
KLKEAEKTENPLYDSLWQRDYAVDRLVYALEKSGLFEEVIPLCEKEAKKTGNYIRLVRVLLDSGKREKAEEWIYRGIKET
REHETETAHQLLQILLEIKEGEGDWLFVSALETEEFFRHPDISSYSSMQEGAKKAGKWEEVREAAIRYLKNGKLPASKGK
NKEKASILPGVLPKTGLLEKELLKKIKTPVFDLLIKIAIQEEDPQEVIHWYEELKKSGEESQGYWHSISESEIANSVKEK
YPEVALEIWKSLAEKLISEAKVGSYEEASAYIRKIKETFEASGKKEEWENYLSEIKEANSRKKKLLGILDTLGEDRIIKV

Sequences:

>Translated_640_residues
MPPENKNSDPFEELKWSDLQDWAGGKATAKGIKYQEEERVKEIKRTPEGSLVALVEGTSDYFTEIFLKDGKLSSVCTCPV
GHDCKHGVAAVLEYLELAEQGEEVLIASEEDPFVARARQEYTGDEISALGEEESSARALREYLQRLTRTELIEILVTFAE
KDTGLGKYLKERQTLSAENVEEIVGEVYSELDELLEEAGDFEYADYEMDVPDFLDVQVGLESLLDSGHPDELLDIGKELM
DRYEKIADYDEEGEIGTKISFCMDVVFKALTRSSIPAHEKMLYMLEIELRDNYNILNEHGFWEKDFTPEEWRRFSESLKI
KLKEAEKTENPLYDSLWQRDYAVDRLVYALEKSGLFEEVIPLCEKEAKKTGNYIRLVRVLLDSGKREKAEEWIYRGIKET
REHETETAHQLLQILLEIKEGEGDWLFVSALETEEFFRHPDISSYSSMQEGAKKAGKWEEVREAAIRYLKNGKLPASKGK
NKEKASILPGVLPKTGLLEKELLKKIKTPVFDLLIKIAIQEEDPQEVIHWYEELKKSGEESQGYWHSISESEIANSVKEK
YPEVALEIWKSLAEKLISEAKVGSYEEASAYIRKIKETFEASGKKEEWENYLSEIKEANSRKKKLLGILDTLGEDRIIKV
>Mature_639_residues
PPENKNSDPFEELKWSDLQDWAGGKATAKGIKYQEEERVKEIKRTPEGSLVALVEGTSDYFTEIFLKDGKLSSVCTCPVG
HDCKHGVAAVLEYLELAEQGEEVLIASEEDPFVARARQEYTGDEISALGEEESSARALREYLQRLTRTELIEILVTFAEK
DTGLGKYLKERQTLSAENVEEIVGEVYSELDELLEEAGDFEYADYEMDVPDFLDVQVGLESLLDSGHPDELLDIGKELMD
RYEKIADYDEEGEIGTKISFCMDVVFKALTRSSIPAHEKMLYMLEIELRDNYNILNEHGFWEKDFTPEEWRRFSESLKIK
LKEAEKTENPLYDSLWQRDYAVDRLVYALEKSGLFEEVIPLCEKEAKKTGNYIRLVRVLLDSGKREKAEEWIYRGIKETR
EHETETAHQLLQILLEIKEGEGDWLFVSALETEEFFRHPDISSYSSMQEGAKKAGKWEEVREAAIRYLKNGKLPASKGKN
KEKASILPGVLPKTGLLEKELLKKIKTPVFDLLIKIAIQEEDPQEVIHWYEELKKSGEESQGYWHSISESEIANSVKEKY
PEVALEIWKSLAEKLISEAKVGSYEEASAYIRKIKETFEASGKKEEWENYLSEIKEANSRKKKLLGILDTLGEDRIIKV

Specific function: Unknown

COG id: COG4715

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73492; Mature: 73360

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPENKNSDPFEELKWSDLQDWAGGKATAKGIKYQEEERVKEIKRTPEGSLVALVEGTSD
CCCCCCCCCCHHHHCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCHH
YFTEIFLKDGKLSSVCTCPVGHDCKHGVAAVLEYLELAEQGEEVLIASEEDPFVARARQE
HHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
YTGDEISALGEEESSARALREYLQRLTRTELIEILVTFAEKDTGLGKYLKERQTLSAENV
HCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH
EEIVGEVYSELDELLEEAGDFEYADYEMDVPDFLDVQVGLESLLDSGHPDELLDIGKELM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DRYEKIADYDEEGEIGTKISFCMDVVFKALTRSSIPAHEKMLYMLEIELRDNYNILNEHG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCCCCCCCCC
FWEKDFTPEEWRRFSESLKIKLKEAEKTENPLYDSLWQRDYAVDRLVYALEKSGLFEEVI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
PLCEKEAKKTGNYIRLVRVLLDSGKREKAEEWIYRGIKETREHETETAHQLLQILLEIKE
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEGDWLFVSALETEEFFRHPDISSYSSMQEGAKKAGKWEEVREAAIRYLKNGKLPASKGK
CCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
NKEKASILPGVLPKTGLLEKELLKKIKTPVFDLLIKIAIQEEDPQEVIHWYEELKKSGEE
CCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
SQGYWHSISESEIANSVKEKYPEVALEIWKSLAEKLISEAKVGSYEEASAYIRKIKETFE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASGKKEEWENYLSEIKEANSRKKKLLGILDTLGEDRIIKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure 
PPENKNSDPFEELKWSDLQDWAGGKATAKGIKYQEEERVKEIKRTPEGSLVALVEGTSD
CCCCCCCCCHHHHCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCHH
YFTEIFLKDGKLSSVCTCPVGHDCKHGVAAVLEYLELAEQGEEVLIASEEDPFVARARQE
HHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
YTGDEISALGEEESSARALREYLQRLTRTELIEILVTFAEKDTGLGKYLKERQTLSAENV
HCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH
EEIVGEVYSELDELLEEAGDFEYADYEMDVPDFLDVQVGLESLLDSGHPDELLDIGKELM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DRYEKIADYDEEGEIGTKISFCMDVVFKALTRSSIPAHEKMLYMLEIELRDNYNILNEHG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCCCCCCCCC
FWEKDFTPEEWRRFSESLKIKLKEAEKTENPLYDSLWQRDYAVDRLVYALEKSGLFEEVI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
PLCEKEAKKTGNYIRLVRVLLDSGKREKAEEWIYRGIKETREHETETAHQLLQILLEIKE
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEGDWLFVSALETEEFFRHPDISSYSSMQEGAKKAGKWEEVREAAIRYLKNGKLPASKGK
CCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
NKEKASILPGVLPKTGLLEKELLKKIKTPVFDLLIKIAIQEEDPQEVIHWYEELKKSGEE
CCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
SQGYWHSISESEIANSVKEKYPEVALEIWKSLAEKLISEAKVGSYEEASAYIRKIKETFE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASGKKEEWENYLSEIKEANSRKKKLLGILDTLGEDRIIKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA