Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227755

Identifier: 21227755

GI number: 21227755

Start: 1972197

End: 1972985

Strand: Reverse

Name: 21227755

Synonym: MM_1653

Alternate gene names: NA

Gene position: 1972985-1972197 (Counterclockwise)

Preceding gene: 21227756

Following gene: 21227754

Centisome position: 48.16

GC content: 38.4

Gene sequence:

>789_bases
ATGAAAAAAGACTACAAAAAATATTTTTTAGCAGGGCCAATACCCTTAATTTTAGTTATAATTCTATTTTATTTACACCC
GGTTAACGAAGGTCCTCCGCGATCAGAATATTCGGAAGGAATATGGAATAATTGTAATTTTACAAAACCTGCTGAAGAGT
GGTCTGCGGCTGCTAAAAGGTTTGGGGGAGAAAATGCAGTGATTGATCTGGTCGTTGCCCAGGCTCATGAAAATGATCTT
ACATACCTGCCATTTCCTTTTGAAAAAAGTGAAAATGTTTACAGCTACAGTCAGACTGATCAGGTAGAGCCATACCTTAA
AAAATTCGATGAAGATGGCTTGAAGGTGATCCTTTCAATTCAGCCTAATAATGCTGATGTAGCAGATTTGATTGACATTA
TACTTACAAGGTATGGTCATCATGAAAGCATAATAGGGGTAAATGTTGATATGGAATGGAAATTGACCGGGAACCCGTGT
CATGTCAGCAATGAAGAGCGTAACCTCTGGTTAAACAGGGTCCAAAAATACAATCCGGAATTTAAACTGTTTCTGACTTA
TTTTAAAGATTACACCTATTTCCCAGATGATGCAGAAGATGTTGTCATCCTATATGATGGAGAGAAAGCTACTCAAACAA
CACTCATGAGAGAATATGGAAATCTTGCGAGCCATTATACATCAGCAGGAATATATACAGGTTATTCCTCCAGCACCCCG
CCAACAGCATCTCATAAAAGTATCATGGCTGCAGCTCCGAATACGCAGTATATCTTGCATATAGTCTGA

Upstream 100 bases:

>100_bases
CAACAATAAAAGTAGTAGTAATCAGCAGCCTTTTCCTGTGCTACCTGACAGGTAAAGGAGTAAAAGTTAAATTCGGTGCA
AAGAGCTTTGTGGTGAGGTA

Downstream 100 bases:

>100_bases
TAAATATTGGATATCAAAATATCTCTACTTTGAAACTTAAATACGGACCATAATGCCTTCAGAGAATGAATAAAGGACGG
ATCATCAGGAAACGAAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKDYKKYFLAGPIPLILVIILFYLHPVNEGPPRSEYSEGIWNNCNFTKPAEEWSAAAKRFGGENAVIDLVVAQAHENDL
TYLPFPFEKSENVYSYSQTDQVEPYLKKFDEDGLKVILSIQPNNADVADLIDIILTRYGHHESIIGVNVDMEWKLTGNPC
HVSNEERNLWLNRVQKYNPEFKLFLTYFKDYTYFPDDAEDVVILYDGEKATQTTLMREYGNLASHYTSAGIYTGYSSSTP
PTASHKSIMAAAPNTQYILHIV

Sequences:

>Translated_262_residues
MKKDYKKYFLAGPIPLILVIILFYLHPVNEGPPRSEYSEGIWNNCNFTKPAEEWSAAAKRFGGENAVIDLVVAQAHENDL
TYLPFPFEKSENVYSYSQTDQVEPYLKKFDEDGLKVILSIQPNNADVADLIDIILTRYGHHESIIGVNVDMEWKLTGNPC
HVSNEERNLWLNRVQKYNPEFKLFLTYFKDYTYFPDDAEDVVILYDGEKATQTTLMREYGNLASHYTSAGIYTGYSSSTP
PTASHKSIMAAAPNTQYILHIV
>Mature_262_residues
MKKDYKKYFLAGPIPLILVIILFYLHPVNEGPPRSEYSEGIWNNCNFTKPAEEWSAAAKRFGGENAVIDLVVAQAHENDL
TYLPFPFEKSENVYSYSQTDQVEPYLKKFDEDGLKVILSIQPNNADVADLIDIILTRYGHHESIIGVNVDMEWKLTGNPC
HVSNEERNLWLNRVQKYNPEFKLFLTYFKDYTYFPDDAEDVVILYDGEKATQTTLMREYGNLASHYTSAGIYTGYSSSTP
PTASHKSIMAAAPNTQYILHIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29912; Mature: 29912

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDYKKYFLAGPIPLILVIILFYLHPVNEGPPRSEYSEGIWNNCNFTKPAEEWSAAAKR
CCCCHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
FGGENAVIDLVVAQAHENDLTYLPFPFEKSENVYSYSQTDQVEPYLKKFDEDGLKVILSI
CCCCCCEEEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCEEEEEEE
QPNNADVADLIDIILTRYGHHESIIGVNVDMEWKLTGNPCHVSNEERNLWLNRVQKYNPE
CCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
FKLFLTYFKDYTYFPDDAEDVVILYDGEKATQTTLMREYGNLASHYTSAGIYTGYSSSTP
EEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PTASHKSIMAAAPNTQYILHIV
CCCCCCEEEEECCCCCEEEEEC
>Mature Secondary Structure
MKKDYKKYFLAGPIPLILVIILFYLHPVNEGPPRSEYSEGIWNNCNFTKPAEEWSAAAKR
CCCCHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
FGGENAVIDLVVAQAHENDLTYLPFPFEKSENVYSYSQTDQVEPYLKKFDEDGLKVILSI
CCCCCCEEEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCEEEEEEE
QPNNADVADLIDIILTRYGHHESIIGVNVDMEWKLTGNPCHVSNEERNLWLNRVQKYNPE
CCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
FKLFLTYFKDYTYFPDDAEDVVILYDGEKATQTTLMREYGNLASHYTSAGIYTGYSSSTP
EEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PTASHKSIMAAAPNTQYILHIV
CCCCCCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA