Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227751

Identifier: 21227751

GI number: 21227751

Start: 1969213

End: 1969983

Strand: Direct

Name: 21227751

Synonym: MM_1649

Alternate gene names: NA

Gene position: 1969213-1969983 (Clockwise)

Preceding gene: 21227748

Following gene: 21227752

Centisome position: 48.07

GC content: 42.41

Gene sequence:

>771_bases
ATGGAAGAAATTAAAGTTATCCTCGATGTTTCTCCCACAGCTATCTTGCCTCAGATCAAAAGGCTTACAGACAGCGACCT
GGTTATCCAGAAAAATGGCAGCTATGAATTAACAGATATGGGAGAGCAGGTATTCAAAAAAGTCAGGTCCCTTGTAGATG
TACTTTGCCTCGTTGAAAAAGACAACTACTGGATGGAACACGACCTGGATGGAATCCCTCAGTACCTTCTTGACAGGATA
GGAGACATCAAGGACTGCAACCCCATCAAAGCGGATCCCAGCCAGATATTCGAACCAAATACAGAACTTCTGGACTTCTT
TTCTTCTTCCCGCTATCTTATGGTATTTTCCTCTTTTTACAGGCCTGAATTCCTTCCTCTCTTTTTGAAGCTTGCAAGAC
TTGAGTCCGATGTTTCACTTATTTTTACGGAATCTGTGCTCGAAAAGTTTCTCCATAACTATGAACGGAAAATACGTAAA
TTCACCACAATGGACAATACCGAACTTTCTGTCTGTAAGGATGGAGTGAAGATTGCCGAACTCATCGTCTCCGACCGTGG
GATGATGATCTCTCTCTTTGACGACCAGGGCAGGTTCTATCATGAGTATATGCACTGTACCGAGCCTCAGGCAATTTCCT
GGGCAAAAGAGCTCTTTGATTTCTACAAATCAAGGGCTTTAAAGGTTGTAAGCGAGAAAATCATTGACAGTTTTATATGC
ACGTCAGAAAACGAGACATTTGTCGAATCCCAGCTTGTAAGCTTTCACTAA

Upstream 100 bases:

>100_bases
GATAGAGGTGGTTTGAATTCAACCTGAGTTAATAGATGTAGTATTTCGTTCCCAGAAAAGAAGGGATCTACTCCTGCTCC
TGGGAGAAGAACCCAGAACA

Downstream 100 bases:

>100_bases
ATAATGACGATCTCAATAATGACGATCTCAATAATGAGTCTGGATAATGATGATCTCGAATAATTATGATCTCAATAATG
AGCTCGGATAATAATGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEEIKVILDVSPTAILPQIKRLTDSDLVIQKNGSYELTDMGEQVFKKVRSLVDVLCLVEKDNYWMEHDLDGIPQYLLDRI
GDIKDCNPIKADPSQIFEPNTELLDFFSSSRYLMVFSSFYRPEFLPLFLKLARLESDVSLIFTESVLEKFLHNYERKIRK
FTTMDNTELSVCKDGVKIAELIVSDRGMMISLFDDQGRFYHEYMHCTEPQAISWAKELFDFYKSRALKVVSEKIIDSFIC
TSENETFVESQLVSFH

Sequences:

>Translated_256_residues
MEEIKVILDVSPTAILPQIKRLTDSDLVIQKNGSYELTDMGEQVFKKVRSLVDVLCLVEKDNYWMEHDLDGIPQYLLDRI
GDIKDCNPIKADPSQIFEPNTELLDFFSSSRYLMVFSSFYRPEFLPLFLKLARLESDVSLIFTESVLEKFLHNYERKIRK
FTTMDNTELSVCKDGVKIAELIVSDRGMMISLFDDQGRFYHEYMHCTEPQAISWAKELFDFYKSRALKVVSEKIIDSFIC
TSENETFVESQLVSFH
>Mature_256_residues
MEEIKVILDVSPTAILPQIKRLTDSDLVIQKNGSYELTDMGEQVFKKVRSLVDVLCLVEKDNYWMEHDLDGIPQYLLDRI
GDIKDCNPIKADPSQIFEPNTELLDFFSSSRYLMVFSSFYRPEFLPLFLKLARLESDVSLIFTESVLEKFLHNYERKIRK
FTTMDNTELSVCKDGVKIAELIVSDRGMMISLFDDQGRFYHEYMHCTEPQAISWAKELFDFYKSRALKVVSEKIIDSFIC
TSENETFVESQLVSFH

Specific function: Unknown

COG id: COG4742

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29855; Mature: 29855

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIKVILDVSPTAILPQIKRLTDSDLVIQKNGSYELTDMGEQVFKKVRSLVDVLCLVEK
CCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHCC
DNYWMEHDLDGIPQYLLDRIGDIKDCNPIKADPSQIFEPNTELLDFFSSSRYLMVFSSFY
CCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCEEHHHHHC
RPEFLPLFLKLARLESDVSLIFTESVLEKFLHNYERKIRKFTTMDNTELSVCKDGVKIAE
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LIVSDRGMMISLFDDQGRFYHEYMHCTEPQAISWAKELFDFYKSRALKVVSEKIIDSFIC
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSENETFVESQLVSFH
CCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEEIKVILDVSPTAILPQIKRLTDSDLVIQKNGSYELTDMGEQVFKKVRSLVDVLCLVEK
CCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHCC
DNYWMEHDLDGIPQYLLDRIGDIKDCNPIKADPSQIFEPNTELLDFFSSSRYLMVFSSFY
CCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCEEHHHHHC
RPEFLPLFLKLARLESDVSLIFTESVLEKFLHNYERKIRKFTTMDNTELSVCKDGVKIAE
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LIVSDRGMMISLFDDQGRFYHEYMHCTEPQAISWAKELFDFYKSRALKVVSEKIIDSFIC
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSENETFVESQLVSFH
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA